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PyRosetta - Applications
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FAQ by admin » Mon, 2010-08-30 04:20 |
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12,981 |
by rmoretti Thu, 2024-06-20 11:16 |
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Scoring a membrane protein in PyRosetta? by tsikosek » Thu, 2014-01-16 15:05 |
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19,837 |
by nh Mon, 2014-04-21 06:48 |
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Minimization Toolkit W/GUI by jadolfbr » Sat, 2011-03-12 15:58 |
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11,310 |
by jadolfbr Mon, 2014-04-21 06:47 |
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antibody.py by franfdez » Mon, 2016-08-01 08:12 |
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10,302 |
by franfdez Thu, 2016-08-04 01:57 |
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Modified Amino Acid Side Chain by jferrie » Fri, 2016-06-17 08:13 |
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10,241 |
by jferrie Mon, 2016-08-01 08:39 |
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Docking with Constraints in PyRosetta by protos_heis » Sat, 2015-03-28 11:16 |
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8,712 |
by protos_heis Mon, 2015-03-30 06:30 |
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Relaxation with PyRosetta by peony » Sat, 2014-02-15 04:36 |
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7,334 |
by jadolfbr Sat, 2017-06-03 20:20 |
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Problems when working with PTMs - cannot make sugar poses by MNP1986 » Thu, 2019-01-10 07:44 |
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7,151 |
by MNP1986 Mon, 2019-01-21 05:56 |
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frelax relaxation with constrains by ast » Fri, 2012-02-24 01:44 |
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6,972 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem with PyRosetta install by fcazals » Wed, 2014-05-21 09:11 |
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6,952 |
by fcazals Tue, 2014-05-27 14:48 |
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Enabling N-Linked Glycans by jzabilansky » Thu, 2014-06-05 11:51 |
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5,866 |
by Labonte Mon, 2014-10-06 14:56 |
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Change in Gibbs free energy (delta delta G) of RNA by wrshoemaker » Thu, 2017-01-26 15:47 |
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5,802 |
by rmoretti Thu, 2017-02-02 09:44 |
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Best scoring function ofr Structure Prediction by Nuria » Thu, 2012-04-05 13:52 |
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4,898 |
by smlewis Mon, 2014-04-21 06:47 |
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partial alignment in pyrosetta by ast » Thu, 2012-02-23 04:16 |
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4,667 |
by smlewis Mon, 2014-04-21 06:47 |
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How to get the Ligand RMSD by oppopomoz » Wed, 2014-06-25 09:26 |
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4,526 |
by rmoretti Tue, 2014-07-01 11:42 |
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Introducing N/C-terminal residues to a pose by MNP1986 » Thu, 2018-08-23 06:09 |
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4,519 |
by MNP1986 Thu, 2018-08-30 06:07 |
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PackRotamersMover not sampling rotamers of small molecule ligand by latashyoussef » Mon, 2016-05-16 21:02 |
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4,178 |
by rmoretti Mon, 2016-09-05 10:43 |
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Refinement using low-resolution electron density by astrofunk12 » Sun, 2011-09-11 05:06 |
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3,740 |
by smlewis Mon, 2014-04-21 06:47 |
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Segmentation Fault when using DockMCMProtocol by latashyoussef » Mon, 2016-05-16 20:10 |
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3,511 |
by latashyoussef Mon, 2016-05-16 22:33 |
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residue_pair_energies by kamau » Fri, 2017-12-01 09:21 |
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3,289 |
by kamau Fri, 2017-12-01 16:50 |
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Problem importing residue params file by joeri » Sat, 2021-03-20 04:01 |
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3,244 |
by joeri Tue, 2021-03-23 10:06 |
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How to use MPI with PyRosetta? by sn » Fri, 2018-06-01 15:44 |
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3,172 |
by rmoretti Thu, 2018-06-28 11:52 |
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Random perturbations to peptide backbone by Martin Floor » Mon, 2018-12-10 17:16 |
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3,165 |
by MNP1986 Mon, 2019-08-12 05:18 |
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Minimising space exploration during docking by asf40 » Mon, 2014-09-22 10:37 |
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2,964 |
by rmoretti Tue, 2014-09-23 08:05 |
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Distorted metal coordination geometry after relaxation (SetupMetalMover was used, fold tree and constraints were set manually) by TLP » Tue, 2020-01-21 11:18 |
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2,728 |
by TLP Fri, 2020-04-03 10:20 |
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How to make FastRelax use smaller number of rotamers from PyRosetta app? by sn » Tue, 2018-08-21 15:55 |
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2,723 |
by smlewis Wed, 2018-08-22 12:35 |
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Relaxation vs minimisation by mm » Fri, 2020-03-13 04:49 |
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2,519 |
by mm Fri, 2020-03-20 05:06 |
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How to use new functions introduced in 2.0? by mn » Wed, 2011-03-02 22:10 |
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2,476 |
by mn Mon, 2014-04-21 06:47 |
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constrain 2 proteins in protein-protein docking by PatC » Wed, 2020-08-12 08:38 |
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2,416 |
by matteoferla Sat, 2020-08-15 08:17 |
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Constraints residues in different chain in protein-protein docking by nasim.soltani58 » Sat, 2020-11-28 10:24 |
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2,385 |
by nasim.soltani58 Mon, 2020-11-30 12:24 |
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Protein Protein Docking with bound ligands by ajaniharesh » Mon, 2019-02-25 06:33 |
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2,352 |
by rmoretti Thu, 2019-05-09 13:47 |
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Running FastFloppyTail on IDPs by Thomas » Tue, 2020-07-28 12:40 |
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2,340 |
by Thomas Tue, 2020-07-28 20:29 |
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Relevant number of cycles of loop closure required by vasavi » Mon, 2018-06-11 02:55 |
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2,284 |
by smlewis Mon, 2018-06-11 19:38 |
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Docking high and low resolution by nasim.soltani58 » Thu, 2020-12-17 10:26 |
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2,206 |
by nasim.soltani58 Thu, 2020-12-17 14:12 |
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trans-ACPC by tttt » Wed, 2019-12-04 03:23 |
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2,133 |
by vmulligan Wed, 2019-12-04 12:56 |
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Breaking fastDesign into more stages or writing something custom by broomsday » Mon, 2020-03-16 06:52 |
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1,783 |
by vmulligan Tue, 2020-03-17 12:06 |
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Pocket Constraint by jferrie » Thu, 2018-08-30 18:37 |
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1,567 |
by jferrie Thu, 2018-08-30 18:38 |
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Rosettasurface in Pyrosetta 4 by Oaham » Mon, 2021-11-22 23:35 |
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1,453 |
by matteoferla Mon, 2021-11-29 09:13 |
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Membrane-bound relaxation constrained by an ED map by matteoferla » Fri, 2020-10-30 07:25 |
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1,222 |
by matteoferla Fri, 2020-10-30 07:25 |
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High Resolution Docking with DockMCMProtocol by hjacomet » Thu, 2020-10-29 09:02 |
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1,145 |
by hjacomet Thu, 2020-10-29 09:10 |
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Minimizer Iterations by hjacomet » Tue, 2020-09-29 01:33 |
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1,127 |
by hjacomet Tue, 2020-09-29 01:33 |
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InterfaceAnalyzerMover with more than two chains by franz72 » Fri, 2023-08-04 08:33 |
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1,040 |
by rmoretti Sun, 2023-08-06 18:32 |
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How can I insert my variable length fragmrnts library into pyrosetta? by michelleqyh » Tue, 2020-08-04 07:22 |
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950 |
by michelleqyh Tue, 2020-08-04 07:22 |
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Ab initio peptide design to use as ligands in docking by archaeopteryx » Tue, 2023-06-27 11:09 |
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819 |
by rmoretti Wed, 2023-06-28 12:27 |
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How to use pyrosetta to generate decoys of RNA with different RMSDs (e.g. 1Å, 5Å, 10Å). by Alice123 » Fri, 2023-02-17 18:24 |
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579 |
by Alice123 Fri, 2023-02-17 18:24 |
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Altered pLDDT scores after running FastRelax on AlphaFold Multimer output pdb files by franz72 » Sun, 2023-09-17 14:08 |
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569 |
by franz72 Sun, 2023-09-17 14:08 |
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NMR NOE based structure prediction by Pooja » Sun, 2023-09-24 23:39 |
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517 |
by Pooja Sun, 2023-09-24 23:40 |
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ideal A-form RNA Helix by tspich » Wed, 2023-05-17 03:01 |
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478 |
by tspich Wed, 2023-05-17 03:01 |
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Demo scripts for proteinmpnn in pyrosetta by lwhitm1 » Wed, 2023-11-08 17:57 |
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393 |
by lwhitm1 Wed, 2023-11-08 17:57 |
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Scoring function for disordered peptide ddG calculations? by austin.weigle.usda » Tue, 2024-05-28 14:52 |
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130 |
by rmoretti Thu, 2024-06-20 11:22 |