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Rosetta 3 - General
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ab initio folding part of a protein by attesor » Wed, 2013-03-06 04:39 |
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2,348 |
by smlewis Mon, 2014-04-21 06:47 |
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rosetta nonlocal application by mintseris » Tue, 2013-12-31 13:13 |
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2,375 |
by rmoretti Mon, 2014-04-21 06:48 |
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Looking for collaboration. by ac.research » Mon, 2017-03-06 04:54 |
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1,942 |
by rmoretti Mon, 2017-03-06 08:37 |
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partial charge of params file in ligand docking by rohi » Fri, 2021-05-28 08:43 |
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1,608 |
by rmoretti Fri, 2021-05-28 08:54 |
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Possible documentation error by imurch » Tue, 2012-04-17 00:11 |
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2,487 |
by Anonymous Mon, 2014-04-21 06:47 |
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rosettautil module not imported cleanly by python scripts by franfdez » Tue, 2013-08-27 01:25 |
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3,194 |
by rmoretti Mon, 2014-04-21 06:48 |
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Evaluate Docking Result by byin » Thu, 2014-07-03 11:31 |
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2,657 |
by rmoretti Wed, 2014-07-16 08:07 |
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known disulfides in Remodel sequence by matteoferla » Mon, 2018-09-10 06:43 |
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1,903 |
by matteoferla Thu, 2018-09-13 06:21 |
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ddG of multiple mutations on a monomer by hltorresvera » Mon, 2021-02-01 16:54 |
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2,434 |
by paulbo Sun, 2024-02-04 22:03 |
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Domain Insertion equivalent in Rosetta 3.2 by SenyorDrew » Wed, 2011-02-09 09:47 |
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2,210 |
by smlewis Mon, 2014-04-21 06:47 |
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PDB output sum by enoee » Fri, 2010-07-16 12:29 |
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2,225 |
by smlewis Mon, 2014-04-21 06:47 |
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replace a short helix by berk » Wed, 2013-06-05 10:19 |
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2,103 |
by rmoretti Mon, 2014-04-21 06:48 |
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Docking with glutathione by phanvy » Wed, 2015-04-29 22:25 |
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2,120 |
by rmoretti Thu, 2015-04-30 07:13 |
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Enumeration of Amino Acid identities by achambe » Wed, 2016-06-15 15:28 |
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1,990 |
by rmoretti Wed, 2016-06-15 16:06 |
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Installing rosetta 3.0 by dalemu » Thu, 2009-09-24 13:28 |
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2,912 |
by smlewis Mon, 2014-04-21 06:47 |
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3D Structure Prediction by anirbanzz » Sat, 2010-04-17 02:47 |
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2,785 |
by smlewis Mon, 2014-04-21 06:47 |
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angle constraints by gw » Tue, 2011-07-19 07:49 |
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2,620 |
by smlewis Mon, 2014-04-21 06:47 |
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Docking individual residue ussing RosettaDock by a-eatemadi@razi... » Wed, 2017-09-06 05:50 |
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1,800 |
by rmoretti Wed, 2017-09-06 08:47 |
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how to add constrains in flexible peptide docking by kingbo2008 » Fri, 2011-04-29 07:55 |
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2,438 |
by smlewis Mon, 2014-04-21 06:47 |
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RMS in Score Application by brspurri » Thu, 2011-12-29 09:19 |
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4,149 |
by smlewis Mon, 2014-04-21 06:47 |
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Using logic in resfile, Rosetta Scripts by tsztain » Wed, 2017-03-22 13:50 |
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1,863 |
by smlewis Wed, 2017-03-22 14:02 |
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Modeling transmembrane and intracellular domain by Sunyp_IM » Sun, 2018-04-08 06:44 |
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1,794 |
by jkleman Sat, 2018-04-14 10:55 |
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The question about FavorNativeResidue by asbelx » Fri, 2019-04-12 20:02 |
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1,808 |
by rmoretti Tue, 2019-07-09 15:57 |
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Unrecognized D-Leu name / C-terminal ACE by almeida85 » Thu, 2022-08-11 07:43 |
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806 |
by almeida85 Fri, 2022-08-12 05:56 |
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Error about rifdocking by ng98 » Mon, 2024-01-08 16:21 |
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403 |
by rmoretti Tue, 2024-01-09 23:41 |
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model protein at low pH by ytao » Mon, 2012-11-05 07:52 |
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2,994 |
by smlewis Mon, 2014-04-21 06:47 |
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Atom_.cc line 304 by fred » Thu, 2014-09-11 12:04 |
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2,228 |
by rmoretti Fri, 2014-09-12 09:11 |
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What is "repack", "prepack"? by cossio » Wed, 2015-11-04 17:59 |
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6,133 |
by rmoretti Tue, 2015-11-10 11:52 |
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"abinitio" with mpi by al614 » Wed, 2016-10-12 12:17 |
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2,374 |
by rmoretti Fri, 2016-10-14 15:46 |
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Rosetta changing Atom Name in PDB ATOM record? by chrisHKL » Tue, 2020-03-03 20:50 |
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1,647 |
by smlewis Wed, 2020-03-04 07:40 |
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ab initio protein structure prediction by croshong » Wed, 2009-12-16 23:25 |
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2,314 |
by smlewis Mon, 2014-04-21 06:47 |
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Adding NCAA with Metal Ion by MustafaBughio » Mon, 2022-11-28 15:07 |
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953 |
by JasonIsaac Mon, 2022-12-05 18:41 |
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How to get fragment library from robetta server for mre than 1000 residue sequence? by Danielsebas » Wed, 2019-09-18 07:53 |
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1,586 |
by rmoretti Wed, 2019-09-18 10:49 |
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protein design for increasing its affinity towards ligand by rohi » Fri, 2020-10-30 11:33 |
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1,458 |
by rmoretti Tue, 2021-02-09 12:25 |
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Multi-metric enzyme docking with substrate by Wang Zhe » Sat, 2021-11-20 04:41 |
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1,162 |
by matteoferla Mon, 2021-12-13 02:27 |
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Structure Prediction of protein mutant using relax by Delfosse57 » Tue, 2023-01-10 13:26 |
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763 |
by JW_24 Tue, 2023-01-24 04:55 |
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Site-wide installations and 64-bit builds by bene » Tue, 2009-10-20 10:16 |
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2,155 |
by smlewis Mon, 2014-04-21 06:47 |
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How to site the scoring application in rosetta3.1? by doranhen » Thu, 2012-07-05 10:07 |
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2,533 |
by smlewis Mon, 2014-04-21 06:47 |
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fragment_picker error secondarysimilarity.cc line:132 by leanawen » Mon, 2013-04-15 14:33 |
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2,219 |
by smlewis Mon, 2014-04-21 06:47 |
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Is there a way to calculate chi1 and chi1+chi differences between two structures? by sn » Thu, 2017-04-20 21:46 |
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2,184 |
by rmoretti Fri, 2017-04-21 07:52 |
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Sequence symmetry during FastDesign for repeat protein design by cttm4a1 » Tue, 2022-09-06 21:02 |
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783 |
by rmoretti Wed, 2022-09-07 09:19 |
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MoveMap file for backrub by jiyongpark.77 » Sat, 2009-07-18 03:53 |
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2,518 |
by smlewis Mon, 2014-04-21 06:47 |
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Structure prediction based on template -> Documentation comparative modeling of protein structures by maxebert » Sun, 2011-03-20 01:15 |
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3,252 |
by rmoretti Mon, 2014-04-21 06:47 |
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tyrosine structure error by dave » Mon, 2012-04-30 04:38 |
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2,247 |
by frichter Mon, 2014-04-21 06:47 |
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Reproducing Robetta AB initio setup by jason-rosetta » Sat, 2014-10-04 04:26 |
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2,418 |
by jadolfbr Fri, 2014-10-31 08:55 |
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Structure refinement with RDC constraint by shushunur » Thu, 2018-01-18 00:44 |
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2,315 |
by rmoretti Tue, 2018-01-30 09:08 |
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Program frozen at "protocols.jobdist.JobDistributors: (0) Master Node -- Waiting for job request; tag_ = 1" by Xinhang » Sat, 2020-04-11 14:30 |
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1,794 |
by vmulligan Sat, 2020-04-11 17:40 |
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I Need Help on Validation for a Ligand Docking Experiment. by tbelec » Sat, 2021-03-20 13:27 |
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1,770 |
by matteoferla Mon, 2021-03-22 08:29 |
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Sequence Profile/Checkpoint file by ojmel » Fri, 2021-04-02 17:29 |
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1,361 |
by taylorjones Mon, 2021-04-05 13:17 |
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Ambiguous constraints are ignored in ab initio by mschneid » Wed, 2014-06-18 04:33 |
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2,439 |
by rmoretti Tue, 2014-07-01 12:21 |
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Docking Local Refine Not Moving Input by SenyorDrew » Sat, 2017-10-21 08:26 |
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1,755 |
by SenyorDrew Mon, 2017-11-20 13:27 |
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How did you begin to learn Rosetta? by mdeklotz » Mon, 2018-07-30 10:08 |
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2,294 |
by jkleman Tue, 2018-07-31 13:19 |
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Fragment Picker score type weights by wellsm10 » Mon, 2020-12-14 13:05 |
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1,537 |
by dgront Thu, 2021-02-11 08:30 |
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error in cluster running by albumns » Mon, 2011-09-05 00:24 |
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2,639 |
by rmoretti Mon, 2014-04-21 06:47 |
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Generating Fragment Libraries for Metal Binding Proteins by buzb » Wed, 2011-01-26 12:43 |
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2,927 |
by kaue Mon, 2014-04-21 06:47 |
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Does Rosetta 3.1 have the 9999 limitation? by wtscrystal » Sat, 2009-11-07 01:18 |
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2,307 |
by smlewis Mon, 2014-04-21 06:47 |
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Error in Running Symmetry Docking cutpoint. by Jacob » Wed, 2011-06-01 08:21 |
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2,413 |
by smlewis Mon, 2014-04-21 06:47 |
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Difference between checkpoint file and PSSM for making fragments by qlj » Fri, 2014-03-21 22:00 |
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4,885 |
by rmoretti Sat, 2014-03-22 11:40 |
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ligand flexibility by dave » Thu, 2015-02-12 08:48 |
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2,287 |
by rmoretti Wed, 2015-02-18 09:17 |
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Problem with match on enzdes by ahuls1 » Thu, 2021-07-29 13:21 |
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1,278 |
by ahuls1 Thu, 2021-07-29 13:23 |
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could restta consider the flexibility of backbone duirng protein docking? by albumns » Wed, 2010-11-24 01:00 |
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2,542 |
by smlewis Mon, 2014-04-21 06:47 |
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Modeling by hwillis » Wed, 2009-08-12 11:07 |
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2,221 |
by frichter Mon, 2014-04-21 06:47 |
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Knowledge check on steric effects by pachecoj » Thu, 2014-10-16 09:13 |
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2,463 |
by rmoretti Thu, 2014-10-16 10:33 |
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I've got two doubts by jrcf » Sun, 2016-01-10 07:45 |
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2,075 |
by smlewis Sun, 2016-01-10 10:02 |
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Antibody Modeling Question by rbehan » Fri, 2016-02-05 13:57 |
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1,965 |
by jadolfbr Fri, 2016-02-05 15:32 |
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Applying dihedral constraints to TRP dipeptide minimization. ACE/NME termni. by reoverstreet » Mon, 2022-07-11 14:39 |
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941 |
by matteoferla Wed, 2022-07-20 10:33 |
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have trouble with "relax" models by wszjzhang » Thu, 2010-01-28 10:02 |
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2,198 |
by smlewis Mon, 2014-04-21 06:47 |
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What's the unit of Rosetta energy function? by Run » Tue, 2014-06-24 00:44 |
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6,348 |
by rmoretti Tue, 2014-07-01 12:45 |
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How to extract antibody from a set of pdb file may may contain antigen? by Sunyp_IM » Mon, 2017-11-13 17:11 |
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1,698 |
by ac.research Sat, 2017-11-18 06:54 |
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mpi + mp_mutate_relax by decrSTL » Thu, 2020-01-16 10:47 |
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1,618 |
by jkleman Thu, 2020-01-16 11:05 |
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Performance improvement in AbinitioRelax and relax 3.2 ??? by smg3d » Sun, 2011-02-06 08:59 |
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2,329 |
by smlewis Mon, 2014-04-21 06:47 |
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ddg energy components by japgar » Tue, 2010-07-13 13:20 |
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33,028 |
by smlewis Mon, 2014-04-21 06:47 |
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How to install Rosetta in Redhat Linux ? by ajaniharesh » Fri, 2012-02-24 02:32 |
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5,607 |
by smlewis Mon, 2014-04-21 06:47 |
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Scoring when the protein is a different length by gw » Wed, 2012-08-01 08:53 |
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2,983 |
by smlewis Mon, 2014-04-21 06:47 |
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Problem with the top 25 fragments used in the library of 200 nine-residue fragments in AbinitioRelax by MA » Wed, 2017-07-26 01:12 |
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1,640 |
by rmoretti Mon, 2017-08-21 09:55 |
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loop modelling on complex structure by Tianyang89 » Fri, 2020-09-18 07:24 |
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1,397 |
by amelie.stein Mon, 2020-09-28 10:41 |
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problems with cluster program by umeshghosh » Thu, 2010-04-08 07:45 |
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2,556 |
by smlewis Mon, 2014-04-21 06:47 |
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secondary structure prediction for generation of fragment libraries by xpzhang » Sat, 2011-06-25 00:47 |
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3,627 |
by smlewis Mon, 2014-04-21 06:47 |
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missing amino acid by berk » Fri, 2013-06-14 06:07 |
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2,055 |
by smlewis Mon, 2014-04-21 06:48 |
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Computing pairwise energies for rotamers by pachecoj » Sat, 2014-05-03 17:52 |
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2,283 |
by rmoretti Mon, 2014-05-12 07:50 |
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Output fasta of enzdes generated pdbs by eyong123 » Tue, 2015-05-19 08:07 |
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2,363 |
by rmoretti Mon, 2015-05-25 11:07 |
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multiple symmetry definition files by sdh_h » Wed, 2016-06-29 09:31 |
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1,954 |
by rmoretti Wed, 2016-06-29 10:20 |
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Fixing certain residues during refinement by ckdenist » Thu, 2019-08-29 14:00 |
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1,901 |
by jadolfbr Thu, 2019-08-29 14:29 |
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about the option -constraints:cst_fa_file & -constraints:cst_fa_weight by jiongzhang » Sat, 2010-12-25 12:55 |
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3,445 |
by smlewis Mon, 2014-04-21 06:47 |
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decoy vs pose by Anonymous » Fri, 2012-06-15 02:46 |
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2,817 |
by smlewis Mon, 2014-04-21 06:47 |
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patch file modification for ser_phosphorylated.txt by hajar » Sun, 2020-06-21 00:49 |
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1,788 |
by matteoferla Tue, 2020-06-23 10:58 |
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Installing on windows using MinGW by abdullah_ahmed » Wed, 2010-09-15 08:45 |
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2,058 |
by smlewis Mon, 2014-04-21 06:47 |
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ERROR: Your compiler does not have full support for C++11 regex, and therefore can't support RegEx_based_CDR_Detector/antibody g by yliang20 » Mon, 2022-08-08 16:59 |
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1,116 |
by rmoretti Tue, 2022-08-09 06:52 |
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unit and scientific tests by tricia » Sat, 2009-05-09 23:29 |
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2,216 |
by smlewis Mon, 2014-04-21 06:47 |
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Compilation in Mac OS 10.6 by rjn » Thu, 2010-02-18 12:35 |
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2,319 |
by smlewis Mon, 2014-04-21 06:47 |
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unidentifiable C++ exception in both linux and window. by wajidarshad » Tue, 2015-10-27 08:12 |
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2,078 |
by rmoretti Tue, 2015-10-27 08:46 |
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Error in src/protocols/membrane/util.cc line: 1224 by renedominik » Tue, 2020-02-11 08:10 |
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1,506 |
by renedominik Wed, 2020-02-12 06:16 |
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Error about using BuildDeNovoBackboneMover by ng98 » Wed, 2024-05-29 01:47 |
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138 |
by rmoretti Thu, 2024-06-20 13:22 |
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make_fragments.pl without sparks by nannemdp » Mon, 2014-06-09 13:18 |
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2,319 |
by rmoretti Tue, 2014-06-10 11:34 |
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why not scoring function in loop model? by albumns » Thu, 2011-01-06 00:13 |
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2,352 |
by smlewis Mon, 2014-04-21 06:47 |
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Version of VALL Database and Corresponding Constraint Coordinate File for Fragment Generation by jurkm » Mon, 2011-05-02 03:00 |
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3,320 |
by smlewis Mon, 2014-04-21 06:47 |
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Combine flags file with command line arguments? by cossio » Mon, 2014-12-22 13:52 |
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3,391 |
by smlewis Tue, 2014-12-23 13:58 |
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can not find a residue type that matches the residue HIS_P:NtermProteinFull by tarsis » Wed, 2017-04-05 08:51 |
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2,801 |
by rmoretti Fri, 2017-04-14 08:37 |
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Segmentation fault (core dumped) denovo_density.linuxgccrelease by ahmadkhalifa » Sun, 2018-04-15 17:52 |
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2,127 |
by smlewis Mon, 2018-04-16 16:32 |
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How to determine the value size in block of *.cst files? by weifulei » Sun, 2019-05-05 19:56 |
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1,748 |
by rmoretti Tue, 2019-07-09 15:48 |