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Rosetta 3 - General

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Topic / Topic starter Replies Views Last postsort ascending
Normal topic manually changing fixbb residue ref energies
by jtmacd » Wed, 2009-11-25 08:43 		4
 4,260 by jtmacd
Mon, 2014-04-21 06:47
Normal topic membrane modeling error!
by wtscrystal » Wed, 2009-12-09 21:28 		3
 5,423 by arthuc01
Mon, 2014-04-21 06:47
Normal topic Checkpoints in Rosetta
by exchhattu » Mon, 2009-10-19 17:47 		2
 3,184 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Only 430 models are generated for membrane prediction
by justin » Wed, 2010-01-06 00:04 		3
 3,757 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1-how to run parallel tasks?
by wtscrystal » Fri, 2009-11-06 03:23 		4
 6,098 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Rosetta membrane prediction!
by wtscrystal » Tue, 2009-11-17 05:55 		0
 2,429 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic activation of filters in rosetta3.0 or later
by exchhattu » Thu, 2009-12-03 17:52 		2
 2,897 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Citing Rosetta3.0
by ctaylor » Fri, 2009-10-09 11:42 		1
 5,273 by smlewis
Mon, 2014-04-21 06:47
Normal topic using constraints with AbinitioRelax (Rosetta 3.1)
by ndousis » Fri, 2009-12-18 08:56 		8
 8,966 by ndousis
Mon, 2014-04-21 06:47
Normal topic how to do ensemble docking using rosetta3.1
by lqzhang » Mon, 2010-01-11 10:31 		1
 2,258 by sid
Mon, 2014-04-21 06:47
Normal topic Error in RMSD calculation when native sequence deviates
by abdullah » Tue, 2009-11-10 08:56 		1
 2,784 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab Initio folding of protein with multiple chains?
by myang » Tue, 2009-11-24 13:01 		0
 1,685 by myang
Mon, 2014-04-21 06:47
Normal topic Parallel Installation of ROSETTA3.1
by anirbanzz » Mon, 2009-12-07 21:09 		1
 2,280 by smlewis
Mon, 2014-04-21 06:47
Normal topic Problems in Loop Modeling
by jklett » Mon, 2009-10-19 07:26 		2
 3,394 by jklett
Mon, 2014-04-21 06:47
Normal topic Clustering Poses from RosettaDock
by ctaylor » Tue, 2009-12-29 06:38 		0
 1,603 by ctaylor
Mon, 2014-04-21 06:47
Normal topic how same random seeds can be used in rosetta for mpi run.
by exchhattu » Wed, 2009-10-28 22:09 		1
 2,866 by smlewis
Mon, 2014-04-21 06:47
Normal topic Could somebody interpret the rosetta's cluster application result?
by exchhattu » Mon, 2009-11-16 01:58 		0
 1,817 by exchhattu
Mon, 2014-04-21 06:47
Normal topic the problem in making fragments
by croshong » Thu, 2009-12-03 17:15 		1
 2,632 by smlewis
Mon, 2014-04-21 06:47
Normal topic Resfile for fixed backbone design
by dyq » Wed, 2009-10-07 10:50 		5
 5,506 by attesor
Mon, 2014-04-21 06:47
Normal topic RNA & protein folding
by sdh » Thu, 2009-12-17 00:58 		0
 1,678 by sdh
Mon, 2014-04-21 06:47
Normal topic RosettaHoles?
by kbala » Thu, 2009-07-30 16:52 		3
 3,957 by smlewis
Mon, 2014-04-21 06:47
Normal topic Homology modeling
by mchldln » Mon, 2009-08-17 13:04 		2
 3,806 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta on snow leopard?
by nitroamos » Thu, 2009-10-01 17:07 		3
 5,148 by nitroamos
Mon, 2014-04-21 06:47
Normal topic Modelling Sheets
by monteirotorres » Thu, 2009-07-02 11:41 		2
 2,977 by monteirotorres
Mon, 2014-04-21 06:47
Normal topic Protein-Protein Docking
by hwillis » Fri, 2009-08-07 01:31 		1
 2,735 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab initio/relax flag file setup
by w107kdk » Fri, 2009-08-28 11:49 		4
 4,837 by w107kdk
Mon, 2014-04-21 06:47
Normal topic Installing rosetta 3.0
by dalemu » Thu, 2009-09-24 13:28 		1
 2,913 by smlewis
Mon, 2014-04-21 06:47
Normal topic build parallel version of Rosetta
by atfrank » Tue, 2009-10-06 22:33 		2
 3,884 by smlewis
Mon, 2014-04-21 06:47
Normal topic MoveMap file for backrub
by jiyongpark.77 » Sat, 2009-07-18 03:53 		1
 2,519 by smlewis
Mon, 2014-04-21 06:47
Normal topic Modeling
by hwillis » Wed, 2009-08-12 11:07 		1
 2,222 by frichter
Mon, 2014-04-21 06:47
Normal topic Installing Rosetta Abinitio make_fragments.pl
by ctaylor » Thu, 2009-09-17 09:20 		2
 3,533 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Problems compiling tests
by molon » Wed, 2009-09-30 07:33 		2
 3,212 by molon
Mon, 2014-04-21 06:47
Normal topic FixBB design design_contrast
by swoody » Tue, 2009-06-30 11:48 		2
 3,021 by swoody
Mon, 2014-04-21 06:47
Normal topic PDB HETATM
by hwillis » Thu, 2009-08-06 12:03 		2
 4,419 by smlewis
Mon, 2014-04-21 06:47
Normal topic demo documentation
by lshi » Fri, 2009-08-28 08:51 		1
 2,247 by smlewis
Mon, 2014-04-21 06:47
Normal topic Radius of Gyration
by ctaylor » Mon, 2009-09-21 12:45 		2
 4,459 by ctaylor
Mon, 2014-04-21 06:47
Normal topic rebuilding and refinement
by exchhattu » Tue, 2009-10-06 21:13 		1
 2,191 by smlewis
Mon, 2014-04-21 06:47
Normal topic Structure Prediction: Max Sequence Length?
by jcsaborio » Tue, 2009-07-14 12:10 		2
 4,152 by jcsaborio
Mon, 2014-04-21 06:47
Normal topic ligand dock residue selection
by Silice » Wed, 2009-08-12 08:57 		2
 3,006 by frichter
Mon, 2014-04-21 06:47
Normal topic Rosetta movie.
by exchhattu » Mon, 2009-09-14 21:02 		1
 2,458 by smlewis
Mon, 2014-04-21 06:47
Normal topic ERROR: Unable to open file: ./1brs_0001.pdb
by dkeidel » Tue, 2009-09-29 17:46 		1
 3,482 by smlewis
Mon, 2014-04-21 06:47
Hot topic SCons compilation error (Windows XP, 32bit)
by CRickert » Mon, 2009-08-03 00:57 		28
 26,229 by Marsia
Mon, 2014-04-21 06:47
Normal topic Problems in installing Rosetta3 in Red Hat Linux
by jjz2009 » Mon, 2009-08-24 19:16 		1
 2,256 by smlewis
Mon, 2014-04-21 06:47
Normal topic make_fragments
by ctaylor » Mon, 2009-09-21 12:41 		2
 3,057 by ctaylor
Mon, 2014-04-21 06:47
Normal topic Rosetta 3.1 seg faults gcc while compiling on Fedora 11
by jtmacd » Fri, 2009-10-02 05:26 		1
 2,452 by smlewis
Mon, 2014-04-21 06:47
Normal topic energy units
by jtmacd » Mon, 2009-07-06 10:39 		1
 3,837 by smlewis
Mon, 2014-04-21 06:47
Normal topic Public subversion / Enzyme design public app
by weallen » Tue, 2009-08-11 20:50 		6
 5,753 by weallen
Mon, 2014-04-21 06:47
Normal topic Intermediate file insertion
by exchhattu » Wed, 2009-09-02 18:44 		2
 2,828 by exchhattu
Mon, 2014-04-21 06:47
Normal topic ClusterApp hogs way too much memory...
by IgaK » Tue, 2009-09-29 00:14 		5
 5,173 by w107kdk
Mon, 2014-04-21 06:47
Normal topic modeling loops between domains
by dhorita » Thu, 2009-03-05 14:48 		6
 6,109 by jarod
Mon, 2014-04-21 06:47
Normal topic How to input constraints?
by violetsha7 » Wed, 2009-05-13 00:13 		7
 9,595 by smlewis
Mon, 2014-04-21 06:47
Normal topic Ab Initio structure prediction
by abhishek » Tue, 2009-04-21 23:37 		0
 1,697 by abhishek
Mon, 2014-04-21 06:47
Normal topic possible idealize app bug - residues being deleted
by jtmacd » Mon, 2009-06-08 06:27 		2
 2,880 by jtmacd
Mon, 2014-04-21 06:47
Normal topic unit and scientific tests
by tricia » Sat, 2009-05-09 23:29 		1
 2,217 by smlewis
Mon, 2014-04-21 06:47
Normal topic Getting started with Rosetta
by myang » Tue, 2009-04-07 16:25 		1
 2,672 by smlewis
Mon, 2014-04-21 06:47
Normal topic backrub and design
by jtmacd » Thu, 2009-06-04 08:44 		1
 2,333 by jtmacd
Mon, 2014-04-21 06:47
Normal topic how to docking including HETATM
by tricia » Tue, 2009-05-05 22:03 		1
 2,727 by smlewis
Mon, 2014-04-21 06:47
Normal topic error running rosetta3.0
by aschoenr » Wed, 2009-06-10 13:57 		1
 2,815 by jtmacd
Mon, 2014-04-21 06:47
Normal topic How to run Rosetta3 in parallel
by lennylv » Mon, 2009-03-30 04:21 		6
 10,096 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Modeling only part of the protein structure using ROSETTA
by qiongwu » Fri, 2009-05-29 09:08 		5
 5,123 by smlewis
Mon, 2014-04-21 06:47
Normal topic how to keep native structure when do loop modeling
by zlni » Sun, 2009-05-03 10:12 		4
 4,409 by zlni
Mon, 2014-04-21 06:47
Normal topic distance contraints file
by tricia » Wed, 2009-06-10 13:28 		0
 1,540 by tricia
Mon, 2014-04-21 06:47
Normal topic ERROR: PDB reader is ignoring atom
by phanvy » Wed, 2014-04-16 17:59 		2
 3,830 by phanvy
Mon, 2014-04-21 03:58
Normal topic Binary silent Output file reading problem
by wlzhang » Sun, 2014-04-20 17:47 		1
 2,475 by wlzhang
Sun, 2014-04-20 18:17
Normal topic Cluster application, How does it sort decoys by energy?
by Apiwat » Wed, 2014-04-16 01:52 		2
 3,039 by Apiwat
Thu, 2014-04-17 09:56
Normal topic dG/dsasa , What is the exact meaning?
by Apiwat » Sun, 2014-04-13 00:38 		2
 4,577 by Apiwat
Thu, 2014-04-17 09:56
Normal topic backrub score different from calculated score
by attesor » Wed, 2014-04-09 07:34 		3
 3,901 by rmoretti
Thu, 2014-04-10 07:38
Normal topic # decoys of silent
by fred » Wed, 2014-04-02 06:00 		3
 3,635 by fred
Fri, 2014-04-04 11:34
Normal topic how to identify selected interface residues
by vijayaraj81 » Mon, 2014-03-31 01:40 		3
 4,620 by rmoretti
Tue, 2014-04-01 08:12
Normal topic what rotamer lib is used in rosetta3.5?
by Lindsay » Thu, 2014-02-06 16:11 		6
 6,631 by rmoretti
Fri, 2014-03-28 09:03
Normal topic How to allow rosetta to recognize the ASP and protonated ASP?
by Jeffrey_Chen » Mon, 2014-03-24 20:34 		2
 4,255 by Jeffrey_Chen
Tue, 2014-03-25 23:06
Normal topic Difference between checkpoint file and PSSM for making fragments
by qlj » Fri, 2014-03-21 22:00 		1
 4,886 by rmoretti
Sat, 2014-03-22 11:40
Normal topic running Rosetta locally using commands generated by the Robetta web server
by cneale » Sat, 2014-03-15 11:48 		3
 4,412 by cneale
Fri, 2014-03-21 18:13
Normal topic Reproducing Rosetta++ scoring function with Rosetta 3?
by JuliusSu » Mon, 2014-03-17 21:15 		7
 7,573 by JuliusSu
Wed, 2014-03-19 20:38
Normal topic make_fragment.pl Error!
by Apiwat » Sat, 2014-02-15 13:35 		12
 14,828 by Apiwat
Tue, 2014-03-11 09:42
Normal topic Does RNA parses checkpoint matrix as well as protein
by qlj » Wed, 2014-03-05 06:03 		2
 2,998 by qlj
Thu, 2014-03-06 22:20
Normal topic Resfile
by vijayaraj81 » Thu, 2014-02-27 01:14 		8
 9,202 by vijayaraj81
Tue, 2014-03-04 05:07
Normal topic Rigid Body & Flexible Minimization
by Hanieh » Thu, 2014-02-06 12:37 		2
 4,085 by Hanieh
Fri, 2014-02-28 12:43
Normal topic Determining Rosetta version from directory
by linucks » Fri, 2014-02-28 04:04 		1
 3,123 by smlewis
Fri, 2014-02-28 05:45
Normal topic smoothly kill a mpirun process
by fred » Tue, 2014-02-18 06:06 		2
 5,441 by Ashafix
Wed, 2014-02-19 06:53
Normal topic Number of conformations needed
by JadAbbass » Sun, 2014-02-16 13:21 		2
 2,894 by JadAbbass
Tue, 2014-02-18 07:27
Normal topic How to calculate the binding energy of peptide and a protein?
by tianbu » Thu, 2014-02-13 20:44 		9
 11,599 by tianbu
Mon, 2014-02-17 03:36
Normal topic Can rosetta model cyclic peptide?
by Apiwat » Fri, 2014-02-07 02:08 		1
 2,698 by rmoretti
Tue, 2014-02-11 06:24
Normal topic Interface energy vs binding energy
by Apiwat » Wed, 2014-02-05 00:47 		2
 6,434 by Apiwat
Sat, 2014-02-08 01:41
Normal topic Noncanonical amino acid HIP
by Victor » Fri, 2014-01-31 07:45 		2
 4,535 by Victor
Fri, 2014-01-31 10:41

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