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Rosetta++ - General

Topic / Topic starter Repliessort ascending Views Last post
Normal topic what is the F() in rosetta 2.3
by Lindsay » Fri, 2012-06-08 14:44 		1
 3,095 by smlewis
Mon, 2014-04-21 06:47
Normal topic fragment generation - local vs server
by danzinho » Fri, 2008-07-25 02:09 		1
 2,408 by yiliu
Mon, 2014-04-21 06:47
Normal topic docking search: first residue centroids, then full atom?
by pshannon » Wed, 2008-09-03 15:46 		1
 2,519 by yiliu
Mon, 2014-04-21 06:47
Normal topic BLOUSE62
by AndrewBworth » Tue, 2009-06-16 13:32 		1
 3,199 by vanita
Mon, 2014-04-21 06:47
Normal topic Compiling Rosetta++ 3.1 with alternate gcc
by fyros » Thu, 2010-07-22 13:32 		1
 3,996 by smlewis
Mon, 2014-04-21 06:47
Normal topic How to prepare the pdblist file for docking_ensmble in Rosetta3.4
This topic has been moved to "Rosetta 3 - General " (View topic)
Normal topic ligand dock residue selection
by Silice » Mon, 2009-08-03 07:54 		1
 3,063 by Silice
Mon, 2014-04-21 06:47
Normal topic ulfated tyrosine in Rosetta
by yiliu » Thu, 2008-01-10 08:29 		1
 2,335 by yiliu
Mon, 2014-04-21 06:47
Normal topic disulphides are only sometimes formed
by danzinho » Mon, 2009-01-19 08:42 		1
 2,796 by yiliu
Mon, 2014-04-21 06:47
Normal topic Make_fragments.pl database
by TiagoGomes » Wed, 2009-10-14 04:46 		1
 3,210 by brspurri
Mon, 2014-04-21 06:47
Normal topic multiple_processor
by yiliu » Thu, 2008-01-10 08:47 		1
 2,257 by yiliu
Mon, 2014-04-21 06:47
Normal topic how to score a pdb in rosetta 2.3
by Lindsay » Tue, 2012-07-17 08:42 		1
 3,167 by smlewis
Mon, 2014-04-21 06:47
Normal topic test.fasta and test.dat files are not available in Rosetta2.3.0
by suj88 » Mon, 2009-03-23 17:14 		1
 2,981 by yiliu
Mon, 2014-04-21 06:47
Normal topic What's the difference between F and S labeled decoys?
by PaulaBanks » Mon, 2013-08-26 23:44 		1
 2,941 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Fragment files for incomplet protein
by globalcoco » Sat, 2009-04-18 05:16 		1
 2,903 by vanita
Mon, 2014-04-21 06:47
Normal topic GTP-bound proteins
by mbh » Thu, 2008-11-13 11:35 		1
 2,251 by yiliu
Mon, 2014-04-21 06:47
Normal topic RosettaAntibody, Fv without terminal 3 residues
by yuich » Sun, 2010-09-26 21:07 		1
 3,618 by aroop
Mon, 2014-04-21 06:47
Normal topic resemble docking use rosettadock found rms=0 in output
by lqzhang » Sun, 2009-07-19 06:01 		1
 3,186 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Problems in installing Rosetta3 in Red Hat Linux
by jjz2009 » Fri, 2009-08-21 08:21 		1
 3,182 by jjz2009
Mon, 2014-04-21 06:47
Normal topic difference between score and bk_tot
by Lindsay » Wed, 2012-05-23 21:25 		1
 3,076 by smlewis
Mon, 2014-04-21 06:47
Normal topic distributed computing environment support?
by jarod » Sat, 2010-03-13 21:05 		1
 3,383 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta 2.1.1 troubleshooting
by yiliu » Thu, 2008-01-10 08:51 		1
 2,702 by yiliu
Mon, 2014-04-21 06:47
Normal topic Prepacking structures using RosettaDock on a Windows platform
by suj88 » Fri, 2009-03-13 14:20 		1
 4,050 by suj88
Mon, 2014-04-21 06:47
Normal topic how to calc the fa_rep in rosetta2.x?
by tianbu » Tue, 2012-07-31 08:38 		1
 4,083 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Symmetric local protein docking
by efratmas » Mon, 2011-01-17 04:52 		1
 3,235 by smlewis
Mon, 2014-04-21 06:47
Normal topic how long does it take?
by Piter_ » Thu, 2008-05-15 06:10 		1
 2,185 by Elin
Mon, 2014-04-21 06:47
Normal topic Scoring Weights
by AndrewBworth » Tue, 2009-07-28 18:08 		1
 3,413 by momeara
Mon, 2014-04-21 06:47
Normal topic Examples in RosettaDock tutorials
by yiliu » Thu, 2008-01-10 08:27 		1
 2,758 by yiliu
Mon, 2014-04-21 06:47
Normal topic terminus capping
by mbellows » Wed, 2009-10-07 11:16 		1
 3,819 by mboggara
Mon, 2014-04-21 06:47
Normal topic rg cutoff
by yiliu » Thu, 2008-01-10 08:46 		1
 2,306 by yiliu
Mon, 2014-04-21 06:47
Normal topic Compilation Error 1 after 'make gcc' command
by suj88 » Wed, 2009-02-25 14:24 		1
 6,269 by Bob3k
Mon, 2014-04-21 06:47
Normal topic compilation failure in 64-bit mode linux system
by kw8cr » Wed, 2010-02-24 22:21 		1
 4,393 by zdn3023
Mon, 2014-04-21 06:47
Normal topic Computing ddg_binding
by hetu » Mon, 2008-09-29 19:11 		1
 2,657 by yiliu
Mon, 2014-04-21 06:47
Normal topic Alanine Scanning of UbcH7- E6AP Interface
by suj88 » Mon, 2009-03-23 15:58 		1
 4,266 by kristiankrantz
Mon, 2014-04-21 06:47
Normal topic Side chain sampling
by mayo » Wed, 2009-04-15 10:14 		1
 3,098 by kaufmann
Mon, 2014-04-21 06:47
Normal topic Rosetta-2.3.0 build on MAC OSX 10.5.8
by joseph » Wed, 2010-09-08 10:26 		1
 5,040 by smlewis
Mon, 2014-04-21 06:47
Normal topic symmetric design in rosetta3
by sdh » Wed, 2009-07-08 07:30 		1
 3,274 by smlewis
Mon, 2014-04-21 06:47
Normal topic abinitio
by vamsi » Fri, 2008-11-21 12:21 		0
 1,874 by vamsi
Mon, 2014-04-21 06:47
Normal topic Using dipolar coupling restraints in Rosetta v2.3
by pager2 » Mon, 2010-03-08 14:54 		0
 2,635 by pager2
Mon, 2014-04-21 06:47
Normal topic Questions about -fix_natsc and -trim
by mdyini » Thu, 2009-06-11 13:27 		0
 2,194 by mdyini
Mon, 2014-04-21 06:47
Normal topic Rosetta hangs while generating decoys
by lcavallo » Sat, 2009-03-07 02:11 		0
 2,249 by lcavallo
Mon, 2014-04-21 06:47
Normal topic run_prof.py
by joseph » Fri, 2010-11-05 14:38 		0
 2,284 by joseph
Mon, 2014-04-21 06:47
Normal topic Input files of RosettaDNA mode
by r96631028 » Tue, 2009-04-28 04:39 		0
 2,056 by r96631028
Mon, 2014-04-21 06:47
Normal topic Rosetta stops while generating decoys
by jjan » Wed, 2010-01-13 00:45 		0
 2,290 by jjan
Mon, 2014-04-21 06:47
Normal topic rosetta antibody model, the option -snug_fit
by jarod » Thu, 2010-04-01 18:30 		0
 2,556 by jarod
Mon, 2014-04-21 06:47
Normal topic FAQ
by admin » Mon, 2010-08-30 04:22 		0
 6,282 by admin
Sat, 2015-09-05 12:11
Normal topic Docking Protocol ERROR
by bwp » Wed, 2009-04-08 08:41 		0
 2,019 by bwp
Mon, 2014-04-21 06:47
Normal topic How to build a parallel version of rosetta++ (Rosetta2.3.0) ?
by ice_flame » Fri, 2011-03-25 22:20 		0
 2,901 by ice_flame
Mon, 2014-04-21 06:47
Normal topic got here mapping777777 -1 at ~/rosetta/antibody/scripts/ram_blastscript.pl line 10
by wtscrystal » Mon, 2009-05-04 06:08 		0
 2,084 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic Rosetta Academic Workshop Series
by xavier » Mon, 2009-01-26 11:50 		0
 2,690 by xavier
Mon, 2014-04-21 06:47
Normal topic Why so wried way?
by dikov » Fri, 2010-03-05 04:57 		0
 2,714 by dikov
Mon, 2014-04-21 06:47
Normal topic make fragment
by joseph » Sun, 2010-10-31 21:16 		0
 2,357 by joseph
Mon, 2014-04-21 06:47
Normal topic Compiling Mpilan option
by TiagoGomes » Tue, 2009-04-21 05:34 		0
 2,040 by TiagoGomes
Mon, 2014-04-21 06:47
Normal topic How to set gcc optimization level with scons to compile 64bit rosetta-2.3.0
by hazards » Fri, 2009-05-15 14:16 		0
 3,939 by hazards
Mon, 2014-04-21 06:47
Normal topic icc versus gcc and 64bit versus 32bit performances
by lcavallo » Fri, 2009-02-20 15:29 		0
 1,993 by lcavallo
Mon, 2014-04-21 06:47
Normal topic Can Rosetta generate proteins with sidechains ?
by wszjzhang » Thu, 2010-01-07 13:08 		0
 2,275 by wszjzhang
Mon, 2014-04-21 06:47
Normal topic Unrecognized Residues in RosettaDock
by mboggara » Sat, 2010-03-20 19:48 		0
 2,431 by mboggara
Mon, 2014-04-21 06:47
Normal topic Getting the scorefilter value from a calibration run
by lcavallo » Fri, 2009-03-20 06:18 		0
 2,032 by lcavallo
Mon, 2014-04-21 06:47
Normal topic building parallel Rosetta 2.3 on a 64-bit machine
by dwoods » Mon, 2008-10-27 11:21 		0
 1,708 by dwoods
Mon, 2014-04-21 06:47
Normal topic To add/include unusual amino acids in RosettaDesign
by shirleyzheng » Mon, 2009-07-06 09:34 		0
 2,243 by shirleyzheng
Mon, 2014-04-21 06:47
Normal topic Re-building protocol crash
by murgantia » Sun, 2011-03-13 05:28 		0
 2,249 by murgantia
Mon, 2014-04-21 06:47
Normal topic rosetta3 compliation
by sdh » Mon, 2009-05-04 03:16 		0
 1,957 by sdh
Mon, 2014-04-21 06:47
Normal topic Deb or rpm files?
by tlmcraig » Wed, 2008-08-20 23:24 		0
 1,574 by tlmcraig
Mon, 2014-04-21 06:47
Normal topic problems building rosetta 2.3.0 with icc
by lcavallo » Wed, 2009-03-04 05:32 		0
 2,265 by lcavallo
Mon, 2014-04-21 06:47
Normal topic Unable to determine sequence length from pdb file
by imartins » Tue, 2008-09-30 11:50 		0
 1,593 by imartins
Mon, 2014-04-21 06:47
Normal topic -regions
by mdyini » Wed, 2009-11-25 15:35 		0
 2,195 by mdyini
Mon, 2014-04-21 06:47
Normal topic Subclusters - what are they?
by Bob3k » Mon, 2009-06-15 05:58 		0
 2,402 by Bob3k
Mon, 2014-04-21 06:47
Normal topic question about antibody modeling and snugdock process option
by iojeong » Sun, 2023-04-16 19:18 		0
 617 by iojeong
Sun, 2023-04-16 19:18
Normal topic use of constraints
by anusmita_sahoo » Thu, 2010-06-10 10:54 		0
 2,268 by anusmita_sahoo
Mon, 2014-04-21 06:47
Normal topic pose_ligand_docking? and constraint file...
by mdyini » Wed, 2009-07-01 20:13 		0
 2,281 by mdyini
Mon, 2014-04-21 06:47
Normal topic Which vall version are make_fragment based on?
by lennylv » Thu, 2009-04-02 05:00 		0
 2,077 by lennylv
Mon, 2014-04-21 06:47
Normal topic Consistency of interface DDG calculations
by JuliusSu » Sun, 2014-03-30 21:35 		0
 1,703 by JuliusSu
Sun, 2014-03-30 21:35
Normal topic Help with flexible backbone design
by neilcifer » Thu, 2008-11-20 10:45 		0
 2,003 by neilcifer
Mon, 2014-04-21 06:47
Normal topic Cluster methodology
by TiagoGomes » Wed, 2009-04-29 11:53 		0
 2,344 by TiagoGomes
Mon, 2014-04-21 06:47
Normal topic some Q/A about SnugDock
by jarod » Fri, 2010-04-30 20:02 		0
 2,713 by jarod
Mon, 2014-04-21 06:47
Normal topic some posts from old forum
by admin » Tue, 2008-04-22 11:05 		0
 2,490 by admin
Mon, 2014-04-21 06:47
Normal topic Timer
by Temsiri » Sun, 2008-11-09 06:57 		0
 1,545 by Temsiri
Mon, 2014-04-21 06:47