<ROSETTASCRIPTS> <SCOREFXNS> <ScoreFunction name="ref" weights="ref2015_memb.wts" /> </SCOREFXNS> <TASKOPERATIONS> <InitializeFromCommandline name="ifcl"/> <RestrictToRepacking name="rtr" /> <!-- Include membrane-related task operations --> </TASKOPERATIONS> <FILTERS> </FILTERS> <MOVERS> <AddMembraneMover name="add_memb"/> <MembranePositionFromTopologyMover name="init_pos"/> <!-- MINIMIZATION MOVERS --> <FastRelax name="fast_relax" scorefxn="ref" repeats="8"/> <FastRelax name="minimize_interface" scorefxn="ref" repeats="1" task_operations="ifcl,rtr" /> <!-- DOCKING MOVERS --> <Docking name="dock_low" score_low="score_docking_low" score_high="ref" fullatom="0" local_refine="0" optimize_fold_tree="1" conserve_foldtree="0" ignore_default_docking_task="0" design="0" task_operations="ifcl" jumps="1"/> <Docking name="dock_high" score_low="score_docking_low" score_high="ref" fullatom="1" local_refine="1" optimize_fold_tree="1" conserve_foldtree="0" design="0" task_operations="ifcl" jumps="1"/> <SaveAndRetrieveSidechains name="srsc" allsc="0" /> Speeds the move from centroid to full atom mode </MOVERS> <APPLY_TO_POSE> </APPLY_TO_POSE> <PROTOCOLS> <Add mover="add_memb"/> <Add mover="init_pos"/> <Add mover="fast_relax"/> <Add mover="minimize_interface" /> <Add mover="dock_low"/> <Add mover="srsc" /> <Add mover="dock_high" /> </PROTOCOLS> <OUTPUT scorefxn="ref" /> <!-- Use membrane score function for output --> </ROSETTASCRIPTS>