#with soft repulsive term #Selects the peptide and its neighbouring residues within 6 Angstrom. #Selects parts of the protein far from the interface. Prevent repacking #needs to be only repacked without design. Restrict to repacking #only residues #loop region to be designed to some particular aa_composition #Include commandline inputs #Include current rotamers in the rotamer set #Limit rotamers for aromatic aa - Phe, Tyr and His. #Allow extra rotamers to be sampled #Restrict designing proline and no repack #Repack prolines #Prevent disulphides from repacking and design #set non-interface residues to no repack #not RKDE #Filter based on specific scoretype #Setup foldtree #Miscellaneous Movers #Constraint related Movers #Design Movers/Perturbers #Adds a small, random translation and rotation to Jump1 in the given pose #design and minimize loop, repack_rest #design_loop_terminals_repack_rest using soft repulsive terms #Minimizers #minimization in cartesian space, using soft repulsive term #minimization (kinematic) using soft repulsive term #minimization cartesian #minimization (kinematic) full #Combining movers : Sequential collection of movers that should be executed in the given order