RosettaCommons - Energy function

Publication Type:

Review

PubMed ID:

16581371

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=15651050

A "solvated rotamer" approach to modeling water-mediated hydrogen bonds at protein-protein interfaces.

Sun, 15 Mar 2015 13:45:01 +0000

Authors:

Jiang L, Kuhlman B, Kortemme T, Baker D

Link to article:

Volume:

Year:

2005

Source:

Proteins

Pages:

893-904

Lab:

Baker

Publication Subject:

Publication Type:

PubMed ID:

15651050

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=15459285

A new hydrogen-bonding potential for the design of protein-RNA interactions predicts specific contacts and discriminates decoys.

Sun, 15 Mar 2015 13:45:01 +0000

Authors:

Chen Y, Kortemme T, Robertson T, Baker D, Varani G

Link to article:

Volume:

Year:

2004

Source:

Nucleic Acids Res

Pages:

5147-62

Lab:

Other Labs

Publication Subject:

Publication Type:

PubMed ID:

15459285

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=15118103

Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations.

Sun, 15 Mar 2015 13:45:01 +0000

Authors:

Morozov AV, Kortemme T, Tsemekhman K, Baker D

Link to article:

Volume:

101

Year:

2004

Source:

Proc Natl Acad Sci U S A

Pages:

6946-51

Lab:

Baker

Publication Subject:

Publication Type:

PubMed ID:

15118103

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=12589766

An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes.

Sun, 15 Mar 2015 13:45:01 +0000

Authors:

Kortemme T, Morozov AV, Baker D

Link to article:

Volume:

326

Year:

2003

Source:

J Mol Biol

Pages:

1239-59

Lab:

Baker

Publication Subject:

Publication Type:

PubMed ID:

12589766

Status: