RosettaCommons - Application

Publication Type:

PubMed ID:

26325167

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=26335199

Large scale determination of previously unsolved protein structures using evolutionary information.

Sun, 13 Sep 2015 07:52:27 +0000

Authors:

Ovchinnikov S, Kinch L, Park H, Liao Y, Pei J, Kim DE, Kamisetty H, Grishin NV, Baker D

Link to article:

Volume:

Year:

2015

Source:

Elife

Pages:

Lab:

Baker

Publication Subject:

Abinitio Modeling

Publication Type:

PubMed ID:

26335199

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=26335248

A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design.

Sun, 13 Sep 2015 07:49:40 +0000

Authors:

O Conchuir S, Barlow KA, Pache RA, Ollikainen N, Kundert K, O'Meara MJ, Smith CA, Kortemme T

Link to article:

Volume:

Year:

2015

Source:

PLoS One

Pages:

e0130433

Lab:

Kortemme

Publication Subject:

Servers & Related Software

Publication Type:

PubMed ID:

26335248

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=23563512

Effect of single-point mutations on the stability and immunogenicity of a recombinant ricin A chain subunit vaccine antigen.

Sun, 22 Mar 2015 01:33:54 +0000

Authors:

Thomas JC, O'Hara JM, Hu L, Gao FP, Joshi SB, Volkin DB, Brey RN, Fang J, Karanicolas J, Mantis NJ, Middaugh CR

Link to article:

Volume:

Year:

2013

Source:

Hum Vaccin Immunother

Pages:

744-52

Lab:

Karanicolas

Publication Subject:

Protein Design

Publication Type:

PubMed ID:

23563512

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=24313858

The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.

Sun, 22 Mar 2015 01:31:55 +0000

Authors:

Xia Y, DiPrimio N, Keppel TR, Vo B, Fraser K, Battaile KP, Egan C, Bystroff C, Lovell S, Weis DD, Anderson JC, Karanicolas J

Link to article:

Volume:

135

Year:

2013

Source:

J Am Chem Soc

Pages:

18840-9

Lab:

Karanicolas

Publication Subject:

Protein Design

Publication Type:

PubMed ID:

24313858

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=16809371

Autoinhibitory control of the CaV1.2 channel by its proteolytically processed distal C-terminal domain.

Mon, 16 Mar 2015 19:32:31 +0000

Authors:

Hulme JT, Yarov-Yarovoy V, Lin TW, Scheuer T, Catterall WA

Link to article:

Volume:

576

Year:

2006

Source:

J Physiol

Pages:

87-102

Lab:

Publication Subject:

Publication Type:

PubMed ID:

16809371

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=17567583

Interdomain interaction in the FimH adhesin of Escherichia coli regulates the affinity to mannose.

Mon, 16 Mar 2015 19:30:45 +0000

Authors:

Aprikian P, Tchesnokova V, Kidd B, Yakovenko O, Yarov-Yarovoy V, Trinchina E, Vogel V, Thomas W, Sokurenko E

Link to article:

Volume:

282

Year:

2007

Source:

J Biol Chem

Pages:

23437-46

Lab:

Publication Subject:

Publication Type:

PubMed ID:

17567583

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=18809926

Disulfide locking a sodium channel voltage sensor reveals ion pair formation during activation.

Mon, 16 Mar 2015 19:30:10 +0000

Authors:

DeCaen PG, Yarov-Yarovoy V, Zhao Y, Scheuer T, Catterall WA

Link to article:

Volume:

105

Year:

2008

Source:

Proc Natl Acad Sci U S A

Pages:

15142-7

Lab:

Publication Subject:

Publication Type:

PubMed ID:

18809926

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=20483327

Calculation of the gating charge for the Kv1.2 voltage-activated potassium channel.

Mon, 16 Mar 2015 19:28:35 +0000

Authors:

Khalili-Araghi F, Jogini V, Yarov-Yarovoy V, Tajkhorshid E, Roux B, Schulten K

Link to article:

Volume:

Year:

2010

Source:

Biophys J

Pages:

2189-98

Lab:

Publication Subject:

Publication Type:

PubMed ID:

20483327

Status:

http://www.ncbi.nlm.nih.gov/pubmed/?term=21795699

Allosteric catch bond properties of the FimH adhesin from Salmonella enterica serovar Typhimurium.

Mon, 16 Mar 2015 19:27:29 +0000

Authors:

Kisiela DI, Kramer JJ, Tchesnokova V, Aprikian P, Yarov-Yarovoy V, Clegg S, Sokurenko EV

Link to article:

Volume:

286

Year:

2011

Source:

J Biol Chem

Pages:

38136-47

Lab:

Publication Subject:

Publication Type:

PubMed ID:

21795699

Status: