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SCONS fails compiling legacy minirosetta on g++ error

Category: 
Compilation

Hi:

I am trying to compile minirosetta for a legacy application, but the scons file has a problem with my GCC and even clang build.  I get this error on compile attempt, and I have sucessfully compiled the most recent rosetta build on other ocassions.

Post Situation: 

IS there any source code about protein structure prediction with only sequences information?

Category: 
Structure prediction

Hi,

     I see the server Robetta and I want to know is there any source code ? I download the rosetta source code but fail to find the function about this part?

     Wish your help

Post Situation: 

/usr/bin/ld: cannot find -lsource

Category: 
Compilation

when i build the denovo_density.cc,i got this problem:
/usr/bin/ld: cannot find  -lsource

I search /usr/bin and do not find there is a dlb name "libsource",so i use apt-get to install libsource-highlight-so(no libsource for install),but it does not works

So where could i find this lib

Post Situation: 

De novo structure building with medium resolution map

Category: 
Structure prediction

Dear all,

I am trying to build a model for my protein and I have a medium resolution map (~5-6 A). I tried backbone tracing manually, but many regions are dubious. This protein does not have any homologous protein either, so I am looking for tools to do denovo model building with guided electron density. Is there any available protocol to achieve this?

Best,

Buddy

Post Situation: 

Rosetta_cm Partial Threading Removing Parts of Sequence

Category: 
Structure prediction

Hello,

I am currently trying to homology model the PAR1 receptor with the P2Y12 receptor as my template structure, but for some reason I believe that parts of my sequence are being altered/removed, namely the loop regions.

For example, the original PAR1 sequence is as follows:

Post Situation: 

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