The problem hasn't been solved
This is a general question,
Is there any example of proteins modeled by ROSETTA which is currently being used in industry, whether it is enzymes or therapeutics or any other biomolecules?
Thanks.
Hi,
I have recently used the Docking2 program for refining my docked models (job IDs 22582 and 22583). The first has failed due to some problem in the prepacking stage while for the second one the job was finished. For the first one it appears that there was some error in the input file. The latter although the job has finished it is showing a different error '
Hello,
My apologies in advance if this has already been addressed, but I haven't found the answer elsewhere.
I have a powerful workstation with dual Xeons with 16 cores each. dual booting Windows 7 and Ubuntu Linux. Running on the Windows partition I have used two commercial solutions as well as allowing Rosetta@Home to utilize the system a few hours each night. Modeling done on all three solutions pegs all 32 processing cores at 100% and the completion times on high quality homology modeling is very low (around 10 hours).
Dear all:
Do you knwo how to use Rosetta to calculate the cross correlation value of crystal structure with EM map?
Hi All,
I have installed rosetta on our institute cluster with mpi support (extras=mpi). I want to run rosetta script on the cluster (favor_native_residue.xml). Can anyone kindly let me know how to do it. Attached is a script i used to submit gromacs job in the same cluster (originally it was gromacs_job.sh but I changed it to gromacs_job.txt to attach here) and my favor_native_residue.xml (changed to favor_native_residue.txt for attachment).
Thanks a lot.
Hi everybody,
I have been succesfully used ROSIE for the generation of Ab Fab models, but now I am having problems with one of them and I don't really understand why.
Hi guys,
I am trying to locate the files to generate spatial constraints from homologous template structures for comparative modelling as given in the Thompson and Baker paper from 2011. I can't find them anywhere in the ROSETTA directories. Are they available anywhere?
Hi Rosetta community,
After finally getting the CS-HM-Rosetta run to successfully generate structures, now I'm at the point where I want to select the lowest energy structure among generated structures which suppose to be the closest to the native structure. But in this website:
https://www.rosettacommons.org/demos/latest/public/clustering/README
there're no instructions on plotting.
I'm trying to install Rosetta 2015.05 on my Mac OS X El Capital but the build keeps terminating. I've also tried uninstalling and reinstalling xcode. Any help is appreciated, thanks!