The problem hasn't been solved
Hello,
I submitted an antibody task to the ROSIE server (job ID 101598) and it failed with the following error:
I submitted multiple supercharging jobs. The job is finished but I haven't received the results through email.
What could be the problem?
How can we solve it?
Hi Steven, Rocco, et al.,
Hello, friends,
I was designing the "interface" (possible contacts) of a fusion protein using FastDesign. Since I was running the appliction on a laptop, so far only 200 designed models have been genrated.
I then went on to analyze the result anyway and tried to plot Score VS caRMSD (as shown in the attached file). Here are my questions:
Hi all,
I'm trying to build Rosetta version 3.13 (rosetta.source.release-296) in a CentOS cluster with MPI. I have already installed version 3.7, 3.10 and 3.12 in the same machine. I'm using the very same options as used in older compiled versions (file site.settings indicating where are de mpicc and mpicxx compilers/libraries).
The command line is as below:
./scons.py mode=release bin extras=mpi
After several minutes, I have the following error message:
Hello,
Is ROSIE generally available to install and run locally? The original publications provides steps for setting up a test VM to develop protocols, but this does not seem like a production capable system.
I am not a Rosetta user but have been asked to see if we can run ROSIE on a local cluster.
Thanks,
Jim
Hi!
I have a protein complex that's represented in terms of the sequence, the pairwise distances between the CA atoms, and the phi and psi dihedral angles. These distances and dihedral angles should be reasonably correct. I do not have access to the coordinates (N,CA,C,O, etc.) of this protein complex.
Hi all,
I'm running a protein-protein docking (both partners are ~240 res. monomers) and I get the following error:
---------------------------------------------------------------
[ ERROR ]: Error(s) were encountered when running jobs.
1 jobs failed;
Check the output further up for additional error messages.
---------------------------------------------------------------
Hello everyone,
I'm using Rosetta's docking_ Protocol does the docking of two proteins (one protein is double chain and the other protein is single chain), but when I run the command:
$ROSETTA/main/source/bin/docking_protocol.static.linuxgccrelease @flag_local_docking
It explains that "Cannot compute center of mass of zero residues! ". How to solve this problem?
My parameter settings are as follows: