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Rosetta 3 - General

Topic / Topic startersort descending Replies Views Last post
Normal topic Relax Refinement for complecated targets
by jiongzhang » Fri, 2012-01-20 09:57 		10
 8,426 by jiongzhang
Mon, 2014-04-21 06:47
Normal topic relax structure before design?
by Lindsay » Tue, 2013-11-05 20:50 		7
 10,232 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Relax structure using Membrane Environment Scoring Function
by anna.duncan » Thu, 2010-02-04 08:01 		6
 8,275 by jruhym
Mon, 2014-04-21 06:47
Normal topic relax with restraints
by jtmacd » Mon, 2010-11-08 09:11 		2
 2,953 by jtmacd
Mon, 2014-04-21 06:47
Normal topic Remodel and the depracated EMPTY NC
by matteoferla » Fri, 2021-02-26 07:12 		0
 1,135 by matteoferla
Fri, 2021-02-26 07:12
Normal topic Remodel introduces clashes when stitching
by achambe » Thu, 2016-08-25 17:51 		1
 1,890 by possu
Tue, 2016-08-30 16:57
Normal topic Remote access to Rosetta on Blue Gene or another HPC system?
by rfieldhouse » Mon, 2011-05-16 08:40 		10
 9,635 by rfieldhouse
Mon, 2014-04-21 06:47
Normal topic Renumbering PDB
by jgustat » Wed, 2022-07-27 13:37 		2
 1,087 by jgustat
Thu, 2022-07-28 10:00
Normal topic Repeated entries in silent file
by almeida85 » Fri, 2022-08-05 02:52 		4
 1,599 by almeida85
Thu, 2022-08-11 00:29
Normal topic Repeating sequence in Rosetta de novo protein folding
by orionshih » Wed, 2018-02-07 20:52 		2
 2,230 by sheehajh
Thu, 2018-02-08 21:18
Normal topic replace a short helix
by berk » Wed, 2013-06-05 10:19 		1
 2,104 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Replacing a single residue in a structure
by Wexter300 » Sat, 2023-09-16 14:23 		0
 564 by Wexter300
Sat, 2023-09-16 14:23
Normal topic reporting IteratedConvergence status
by sdh_h » Thu, 2016-08-04 10:05 		2
 2,638 by sdh_h
Thu, 2016-08-04 11:22
Normal topic Reproducing Robetta AB initio setup
by jason-rosetta » Sat, 2014-10-04 04:26 		1
 2,419 by jadolfbr
Fri, 2014-10-31 08:55
Normal topic Reproducing Rosetta++ scoring function with Rosetta 3?
by JuliusSu » Mon, 2014-03-17 21:15 		7
 7,573 by JuliusSu
Wed, 2014-03-19 20:38
Normal topic rerun same experiment on MPI.
by exchhattu » Tue, 2010-02-23 21:14 		7
 7,259 by exchhattu
Mon, 2014-04-21 06:47
Normal topic Rescoring protein docking decoys to get Irms
by lj269 » Thu, 2014-10-23 13:23 		3
 4,276 by rmoretti
Wed, 2014-10-29 14:30
Normal topic Rescoring regions of structures
by erin_cutts » Mon, 2013-07-22 04:43 		2
 3,217 by erin_cutts
Mon, 2014-04-21 06:48
Normal topic Resfile
by vijayaraj81 » Thu, 2014-02-27 01:14 		8
 9,202 by vijayaraj81
Tue, 2014-03-04 05:07
Normal topic Resfile for fixed backbone design
by dyq » Wed, 2009-10-07 10:50 		5
 5,505 by attesor
Mon, 2014-04-21 06:47
Normal topic Residue not found in pose
by lzx32 » Fri, 2011-09-09 03:42 		1
 2,926 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Residue outside res_map range
by amcallister » Fri, 2022-04-22 11:26 		1
 1,008 by aneeqh
Fri, 2022-09-02 13:36
Normal topic Residue outside res_map range
by to-qinbin@163.com » Sat, 2022-09-10 01:56 		1
 1,271 by rmoretti
Mon, 2022-09-12 07:01
Normal topic Residue variant types and fragments
by jadolfbr » Mon, 2013-01-21 09:01 		2
 3,368 by jadolfbr
Mon, 2014-04-21 06:47
Normal topic restrain multiple portions of proteins with MinMover
by Karol » Wed, 2016-09-07 08:29 		4
 5,018 by rmoretti
Thu, 2016-09-08 10:56
Normal topic restrict PackRotamersMover
by pmit » Thu, 2018-05-03 01:48 		0
 1,074 by pmit
Thu, 2018-05-03 01:48
Normal topic restricting space in a design
by ast » Tue, 2012-01-17 06:31 		2
 2,836 by rmoretti
Mon, 2014-04-21 06:47
Normal topic RestrictToRepackingRLT and PreventRepackingRLT
by coomteng@gmail.com » Mon, 2018-03-05 11:19 		2
 2,685 by coomteng@gmail.com
Tue, 2018-03-06 02:31
Normal topic RifDock building error on Ubuntu 20.04，please help！
by guowuchen » Mon, 2022-03-28 03:53 		2
 1,966 by guowuchen
Wed, 2022-03-30 04:20
Normal topic RifGen error on rosetta, "assertion failed", please help!
by guowuchen » Thu, 2022-05-05 06:20 		1
 1,372 by sia
Tue, 2022-07-05 05:47
Normal topic Rigid Body & Flexible Minimization
by Hanieh » Thu, 2014-02-06 12:37 		2
 4,085 by Hanieh
Fri, 2014-02-28 12:43
Normal topic Rigidifying ligand
by Daniel_Levin » Sun, 2024-02-18 12:10 		0
 359 by Daniel_Levin
Sun, 2024-02-18 12:10
Normal topic RMS in Score Application
by brspurri » Thu, 2011-12-29 09:19 		1
 4,150 by smlewis
Mon, 2014-04-21 06:47
Normal topic RMSD filter
by Soler » Sat, 2022-01-15 22:09 		0
 814 by Soler
Sat, 2022-01-15 22:09
Normal topic RNA & protein folding
by sdh » Thu, 2009-12-17 00:58 		0
 1,678 by sdh
Mon, 2014-04-21 06:47
Normal topic RNA add/modify residues
by galvaner » Fri, 2015-09-18 05:49 		1
 2,046 by rmoretti
Sat, 2015-09-19 13:20
Hot topic RNA Denovo RMSD data
by eremma » Thu, 2012-08-02 01:40 		31
 27,659 by eremma
Mon, 2014-04-21 06:47
Normal topic RNA Parameter File
by hdavis9 » Tue, 2010-07-06 11:36 		4
 4,106 by smlewis
Mon, 2014-04-21 06:47
Normal topic RNA update library
by Anne Klein » Mon, 2022-05-16 16:04 		2
 1,188 by Anne Klein
Tue, 2022-05-24 21:38
Normal topic rna_denovo and minize_rna
by frits » Wed, 2013-07-10 00:22 		2
 3,232 by frits
Mon, 2014-04-21 06:48
Normal topic rna_denovo secstruct_general function
by rvandamme » Mon, 2021-02-01 13:39 		0
 951 by rvandamme
Mon, 2021-02-01 13:39
Normal topic Robetta fragments and silent.out-file
by masterofpuppets » Wed, 2015-01-07 04:28 		5
 6,629 by masterofpuppets
Tue, 2015-02-10 03:15
Normal topic Robetta nstruct number
by ac.research » Tue, 2017-01-31 14:27 		1
 1,932 by rmoretti
Thu, 2017-02-02 08:52
Normal topic Rosetta (antibody_designer) performance
by Kihang _Youn » Wed, 2022-03-02 00:48 		7
 2,789 by Kihang _Youn
Thu, 2022-03-10 16:30
Normal topic Rosetta 3.1 compile error, Linux 32 bit
by viochemist » Thu, 2010-07-29 08:40 		11
 12,861 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1 recognizes PO4 group in dockinglocalrefine option?
by nilkoeg » Thu, 2011-03-10 23:19 		4
 5,574 by nilkoeg
Mon, 2014-04-21 06:47
Normal topic Rosetta 3.1 seg faults gcc while compiling on Fedora 11
by jtmacd » Fri, 2009-10-02 05:26 		1
 2,452 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta 3.1-how to run parallel tasks?
by wtscrystal » Fri, 2009-11-06 03:23 		4
 6,098 by lqzhang
Mon, 2014-04-21 06:47
Normal topic Rosetta ab initio with disordered regions
by smiruthi » Thu, 2011-12-15 14:37 		2
 3,051 by smiruthi
Mon, 2014-04-21 06:47
Normal topic Rosetta and design of ligand binding site
by rohi » Mon, 2021-03-15 06:00 		0
 1,013 by rohi
Mon, 2021-03-15 06:31
Normal topic Rosetta and SAM 3.5!
by wtscrystal » Sat, 2009-11-14 22:49 		0
 2,056 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic Rosetta Antibody cuts off light chain?
by ziheng@mit.edu » Thu, 2019-05-02 15:17 		1
 1,580 by jeliazkov
Fri, 2019-05-03 07:00
Normal topic Rosetta Antibody Prepack - Problem HL_A vs. LH_A
by cannond » Fri, 2017-03-03 02:41 		5
 5,683 by cannond
Wed, 2017-03-08 03:00
Normal topic Rosetta Antibody: Unable to open file and terminates
by denatured » Thu, 2019-12-12 11:26 		1
 2,625 by denatured
Fri, 2019-12-13 11:19
Normal topic Rosetta atoms types for enzyme design
by bharat_46010 » Thu, 2011-11-10 06:01 		2
 4,061 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Rosetta can't handle symmetric fold and dock for >10-subunit protein?
by myang » Mon, 2011-09-26 11:52 		3
 3,773 by IAndre
Mon, 2014-04-21 06:47
Normal topic Rosetta changing Atom Name in PDB ATOM record?
by chrisHKL » Tue, 2020-03-03 20:50 		1
 1,649 by smlewis
Wed, 2020-03-04 07:40
Normal topic Rosetta CM - Ignore Sporadic Errors
by Swillard » Wed, 2018-06-13 05:47 		6
 4,852 by rmoretti
Mon, 2018-11-12 14:29
Normal topic Rosetta CM incorrect threading
by ahmadkhalifa » Mon, 2018-08-06 11:09 		6
 5,448 by rmoretti
Fri, 2018-08-24 11:59
Normal topic Rosetta CM round_thread.pdb doesn't exist and can't find pose (id = round)
by ahmadkhalifa » Wed, 2018-05-23 09:51 		2
 3,621 by rmoretti
Thu, 2018-06-28 14:09
Normal topic rosetta compile
by MA » Wed, 2017-04-26 00:46 		2
 2,377 by MA
Thu, 2017-04-27 18:53
Normal topic Rosetta Design Stalling
by Jhreed » Sun, 2016-03-06 14:38 		3
 3,539 by rmoretti
Mon, 2016-03-07 14:20
Normal topic Rosetta Dock
by swoody » Tue, 2009-11-10 16:20 		1
 3,084 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta dock parallel
by mahajanr » Tue, 2010-06-01 16:04 		3
 4,392 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta Dock with MPI / PBS
by edpryor » Wed, 2012-09-05 11:04 		3
 6,562 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta documentation
by Ashafix » Sat, 2013-08-31 06:50 		3
 5,191 by Ashafix
Mon, 2014-04-21 06:48
Normal topic Rosetta Double changing mmCIF chain ID
by Victor Tobiasson » Thu, 2021-05-13 07:57 		2
 1,618 by Victor Tobiasson
Thu, 2021-05-13 08:33
Normal topic Rosetta Enzyme design cst block raises error
by cryosky » Thu, 2021-09-16 08:47 		1
 1,336 by cryosky
Fri, 2021-09-17 22:04
Normal topic Rosetta for design of artifical metalloenzyme
by Delfosse57 » Thu, 2022-05-19 21:47 		1
 993 by matteoferla
Fri, 2022-06-03 01:09
Normal topic Rosetta forcefield terms and interpretation
by zigeuner » Sat, 2013-05-25 16:59 		2
 5,104 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Rosetta groups in Scandinavia
by knutjbj » Mon, 2010-11-15 23:50 		1
 2,367 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta Holes and Packstat scoring
by nick.polizzi » Fri, 2013-08-02 09:06 		1
 3,915 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Rosetta job distribution error
by ss » Thu, 2019-08-01 09:26 		8
 6,091 by ac.research
Mon, 2020-02-10 08:19
Normal topic Rosetta lack of necessary application
by ylwang » Wed, 2018-11-07 01:13 		3
 2,963 by rmoretti
Wed, 2018-11-21 13:50
Normal topic Rosetta matching error
by purvi24 » Mon, 2018-03-12 02:38 		1
 2,314 by smlewis
Mon, 2018-03-12 09:57
Normal topic Rosetta membrane blastpgp/psiblast database problem for lips4 generation
by fbarrera » Tue, 2014-09-16 11:45 		1
 3,115 by rmoretti
Wed, 2014-09-17 10:06
Normal topic Rosetta membrane prediction!
by wtscrystal » Tue, 2009-11-17 05:55 		0
 2,429 by wtscrystal
Mon, 2014-04-21 06:47
Normal topic Rosetta movie.
by exchhattu » Mon, 2009-09-14 21:02 		1
 2,458 by smlewis
Mon, 2014-04-21 06:47
Normal topic rosetta nonlocal application
by mintseris » Tue, 2013-12-31 13:13 		1
 2,376 by rmoretti
Mon, 2014-04-21 06:48
Normal topic Rosetta numbering with missing occupancies
by ShaneOConnor » Fri, 2011-10-07 16:18 		2
 3,701 by ShaneOConnor
Mon, 2014-04-21 06:47
Normal topic rosetta on snow leopard?
by nitroamos » Thu, 2009-10-01 17:07 		3
 5,148 by nitroamos
Mon, 2014-04-21 06:47
Normal topic Rosetta params for taxol
by ahmadkhalifa » Sat, 2019-03-30 22:37 		1
 1,586 by rmoretti
Wed, 2019-04-03 10:03
Normal topic Rosetta reference energy
by Lindsay » Mon, 2012-05-07 07:56 		9
 9,765 by Lindsay
Mon, 2014-04-21 06:47
Normal topic Rosetta relax application for generating ensemble of structures.
by abhi_pe_acharya » Mon, 2018-02-26 09:08 		3
 3,797 by ssrb
Tue, 2018-03-06 14:15
Normal topic Rosetta releases and revision numbers
by ShaneOConnor » Thu, 2011-11-17 13:55 		2
 4,746 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta remodel on intel Xeon Phi
by pablogalazdavison » Wed, 2016-09-14 15:35 		3
 3,578 by pablogalazdavison
Thu, 2016-09-15 16:36
Normal topic Rosetta repacking output
by doranhen » Mon, 2012-12-03 03:44 		5
 6,135 by doranhen
Mon, 2014-04-21 06:47
Normal topic Rosetta Resfile header
by G Mustafa » Mon, 2020-01-20 06:45 		2
 2,400 by G Mustafa
Tue, 2020-01-21 06:04
Normal topic rosetta run error
by isengupta13 » Thu, 2010-06-03 19:00 		2
 3,244 by aminzia
Fri, 2019-07-26 13:14
Normal topic Rosetta script to relax a neighborhood only
by matteoferla » Mon, 2018-10-29 03:34 		1
 1,741 by jadolfbr
Fri, 2018-11-09 09:17
Normal topic rosetta scripts to superimpose multiple segments
by rlwoltz » Fri, 2022-04-29 15:15 		0
 700 by rlwoltz
Fri, 2022-04-29 15:15
Normal topic Rosetta structure refinement alters bound ligand
by ahmadkhalifa » Mon, 2018-07-23 07:49 		1
 2,093 by rmoretti
Fri, 2018-08-03 08:59
Normal topic Rosetta-based projects using and licensing
by SergeyP » Fri, 2018-10-26 15:45 		3
 3,353 by SergeyP
Mon, 2018-11-12 09:19
Normal topic Rosetta-foldtree and docking
by tingting » Tue, 2022-03-15 22:49 		5
 2,439 by aastha.pal
Mon, 2022-06-27 09:55
Normal topic Rosetta/PyRosetta on GPU
by ac.research » Mon, 2017-11-06 05:18 		1
 5,150 by rmoretti
Mon, 2017-11-06 07:36
Normal topic Rosetta3 Tutorials
by smlewis » Fri, 2011-11-18 07:33 		8
 17,729 by rmoretti
Tue, 2019-07-09 10:24
Normal topic Rosetta3 Tutorials Beta Release
by smlewis » Fri, 2011-08-19 13:35 		7
 7,966 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta3.2 cluster application file-reading error
by mdyini » Wed, 2011-03-09 16:59 		3
 5,740 by smlewis
Mon, 2014-04-21 06:47
Normal topic Rosetta3.3 enzyme_design errors
by jtmacd » Wed, 2012-01-25 03:33 		7
 8,216 by rmoretti
Mon, 2014-04-21 06:47
Normal topic Rosetta3.5 src/core/pack/dunbrack/RotamerLibrary.cc permission problem
by ytao » Fri, 2013-06-28 12:13 		2
 3,632 by ytao
Mon, 2014-04-21 06:48