Gray

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Read more about PyRosetta: a script-based interface for implementing molecular modeling algorithms using Rosetta

Computational predictions of the mutant behavior of AraC

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Berrondo, M., Gray, J. J. and Schleif, R.

Volume:

398

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Year:

2010

Reference:

J Mol Biol

Pages:

462-470

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Identification of structural mechanisms of HIV-1 protease specificity using computational peptide docking: implications for drug resistance

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Chaudhury, S. and Gray, J. J.

Volume:

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Year:

2009

Reference:

Structure

Pages:

1636-1648

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Modulation of calcium oxalate dihydrate growth by selective crystal-face binding of phosphorylated osteopontin and polyaspartate peptide showing occlusion by sectoral (compositional) zoning

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Chien, Y. C., Masica, D. L., Gray, J. J., Nguyen, S., Vali, H. and McKee, M. D.

Volume:

284

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Year:

2009

Reference:

J Biol Chem

Pages:

23491-23501

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Solution- and adsorbed-state structural ensembles predicted for the statherin-hydroxyapatite system

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Masica, D. L. and Gray, J. J.

Volume:

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Year:

2009

Reference:

Biophys J

Pages:

3082-3091

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RosettaAntibody: antibody variable region homology modeling server

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Sircar, A., Kim, E. T. and Gray, J. J.

Volume:

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Year:

2009

Reference:

Nucleic Acids Res

Pages:

W474-479

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Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen docking

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Sivasubramanian, A., Sircar, A., Chaudhury, S. and Gray, J. J.

Volume:

Link to Article:

Year:

2009

Reference:

Proteins

Pages:

497-514

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SnugDock: paratope structural optimization during antibody-antigen docking compensates for errors in antibody homology models

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Sircar, A. and Gray, J. J.

Volume:

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Year:

2010

Reference:

PLoS Comput Biol

Pages:

e1000644

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