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Other Rosetta Papers

Structure of KCNE1 and implications for how it modulates the KCNQ1 potassium channel

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Kang, C., Tian, C., Sonnichsen, F. D., Smith, J. A., Meiler, J., George, A. L., Jr., Vanoye, C. G., Kim, H. J. and Sanders, C. R.
Volume: 
47
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
Biochemistry
Pages: 
7999-8006
Lab: 
Other Labs
Publication Type: 
Application
Publication Subject: 
Other Rosetta Papers

Computer-based redesign of a beta sandwich protein suggests that extensive negative design is not required for de novo beta sheet design

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Hu, X., Wang, H., Ke, H. and Kuhlman, B.
Volume: 
16
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
Structure
Pages: 
1799-1805
Lab: 
Kuhlman
Publication Type: 
Application
Publication Subject: 
Other Rosetta Papers

Using quantum mechanics to improve estimates of amino acid side chain rotamer energies

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Renfrew, P. D., Butterfoss, G. L. and Kuhlman, B.
Volume: 
71
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
Proteins
Pages: 
1637-1646
Lab: 
Kuhlman
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

A simple model of backbone flexibility improves modeling of side-chain conformational variability

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Friedland, G. D., Linares, A. J., Smith, C. A. and Kortemme, T.
Volume: 
380
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
J Mol Biol
Pages: 
757-774
Lab: 
Kortemme
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Prediction of protein-protein interface sequence diversity using flexible backbone computational protein design

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Humphris, E. L. and Kortemme, T.
Volume: 
16
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
Structure
Pages: 
1777-1788
Lab: 
Kortemme
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

A new twist in TCR diversity revealed by a forbidden alphabeta TCR

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
McBeth, C., Seamons, A., Pizarro, J. C., Fleishman, S. J., Baker, D., Kortemme, T., Goverman, J. M. and Strong, R. K.
Volume: 
375
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
J Mol Biol
Pages: 
1306-1319
Lab: 
Other Labs
Publication Type: 
Application
Publication Subject: 
Other Rosetta Papers

Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Smith, C. A. and Kortemme, T.
Volume: 
380
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
J Mol Biol
Pages: 
742-756
Lab: 
Kortemme
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Structure prediction of domain insertion proteins from structures of individual domains

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Berrondo, M., Ostermeier, M. and Gray, J. J.
Volume: 
16
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
Structure
Pages: 
513-527
Lab: 
Gray
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Conformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Chaudhury, S. and Gray, J. J.
Volume: 
381
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2008
Reference: 
J Mol Biol
Pages: 
1068-1087
Lab: 
Gray
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

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