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Other Rosetta Papers

Rationally designed integrin beta3 mutants stabilized in the high affinity conformation

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Luo, B. H., Karanicolas, J., Harmacek, L. D., Baker, D. and Springer, T. A.
Volume: 
284
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2009
Reference: 
J Biol Chem
Pages: 
3917-3924
Lab: 
Baker
Publication Type: 
Application
Publication Subject: 
Other Rosetta Papers

Alteration of enzyme specificity by computational loop remodeling and design

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Murphy, P. M., Bolduc, J. M., Gallaher, J. L., Stoddard, B. L. and Baker, D.
Volume: 
106
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2009
Reference: 
Proc Natl Acad Sci U S A
Pages: 
9215-9220
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Structure prediction for CASP8 with all-atom refinement using Rosetta

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Raman, S., Vernon, R., Thompson, J., Tyka, M., Sadreyev, R., Pei, J., Kim, D., Kellogg, E., DiMaio, F., Lange, O., Kinch, L., Sheffler, W., Kim, B. H., Das, R., Grishin, N. V. and Baker, D.
Volume: 
77 Suppl 9
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2009
Reference: 
Proteins
Pages: 
89-99
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

RosettaHoles: rapid assessment of protein core packing for structure prediction, refinement, design, and validation

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Sheffler, W. and Baker, D.
Volume: 
18
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2009
Reference: 
Protein Sci
Pages: 
229-239
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Exploitation of binding energy for catalysis and design

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Thyme, S. B., Jarjour, J., Takeuchi, R., Havranek, J. J., Ashworth, J., Scharenberg, A. M., Stoddard, B. L. and Baker, D.
Volume: 
461
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2009
Reference: 
Nature
Pages: 
1300-1304
Lab: 
Baker
Publication Type: 
Application
Publication Subject: 
Other Rosetta Papers

BCL::contact-low confidence fold recognition hits boost protein contact prediction and de novo structure determination

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Karakas, M., Woetzel, N. and Meiler, J.
Volume: 
17
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2010
Reference: 
J Comput Biol
Pages: 
153-168
Lab: 
Meiler
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Practically useful: what the Rosetta protein modeling suite can do for you

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Kaufmann, K. W., Lemmon, G. H., Deluca, S. L., Sheehan, J. H. and Meiler, J.
Volume: 
49
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2010
Reference: 
Biochemistry
Pages: 
2987-2998
Lab: 
Meiler
Publication Type: 
Review
Publication Subject: 
Other Rosetta Papers

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