Hello
I am trying to model a 514-nt long RNA structure using farfar2. My job failed with the following error
ERROR: Not complementary at positions A 8 and U 13
I do not understand this, A and U are complementary and I have checked both the input sequence and dot bracket files and I dont see any discrepancies. Attaching both inputs and the Rosie crash log file. Could someone please help me sort the error.
Thank you
| Attachment | Size |
|---|---|
 seq_fasta.txt | 534 bytes |
| dotbracket.txt | 515 bytes |
 ROSETTA_CRASH.log | 72.26 KB |
Category:
Post Situation:
The sequence has to be lowercase. (Since Rosetta supports protein modeling too, in a sequence A indicates alanine.)