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Other Rosetta Papers

Contributions of solvent-solvent hydrogen bonding and van der Waals interactions to the attraction between methane molecules in water

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Rank, J. A. and Baker, D.
Volume: 
71
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1998
Reference: 
Biophys Chem
Pages: 
199-204
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Clustering of low-energy conformations near the native structures of small proteins

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Shortle, D., Simons, K. T. and Baker, D.
Volume: 
95
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1998
Reference: 
Proc Natl Acad Sci U S A
Pages: 
11158-11162
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Alm, E. and Baker, D.
Volume: 
96
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1999
Reference: 
Proc Natl Acad Sci U S A
Pages: 
11305-11310
Lab: 
Baker
Publication Type: 
Review
Publication Subject: 
Other Rosetta Papers

Robustness of protein folding kinetics to surface hydrophobic substitutions

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Gu, H., Doshi, N., Kim, D. E., Simons, K. T., Santiago, J. V., Nauli, S. and Baker, D.
Volume: 
8
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1999
Reference: 
Protein Sci
Pages: 
2734-2741
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Experiment and theory highlight role of native state topology in SH3 folding

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Riddle, D. S., Grantcharova, V. P., Santiago, J. V., Alm, E., Ruczinski, I. and Baker, D.
Volume: 
6
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1999
Reference: 
Nat Struct Biol
Pages: 
1016-1024
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Structural transitions in the protein L denatured state ensemble

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Scalley, M. L., Nauli, S., Gladwin, S. T. and Baker, D.
Volume: 
38
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1999
Reference: 
Biochemistry
Pages: 
15927-15935
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Ab initio protein structure prediction of CASP III targets using ROSETTA

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Simons, K. T., Bonneau, R., Ruczinski, I. and Baker, D.
Volume: 
Suppl 3
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1999
Reference: 
Proteins
Pages: 
171-176
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Simons, K. T., Ruczinski, I., Kooperberg, C., Fox, B. A., Bystroff, C. and Baker, D.
Volume: 
34
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
1999
Reference: 
Proteins
Pages: 
82-95
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

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