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Other Rosetta Papers

Accurate computer-based design of a new backbone conformation in the second turn of protein L

Authors: 
Kuhlman, B., O'Neill, J. W., Kim, D. E., Zhang, K. Y. and Baker, D.
Volume: 
315
Link to Article: 
Year: 
2002
Reference: 
J Mol Biol
Pages: 
471-477
Lab: 
Publication Type: 
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Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2

Authors: 
Nauli, S., Kuhlman, B., Le Trong, I., Stenkamp, R. E., Teller, D. and Baker, D.
Volume: 
11
Link to Article: 
Year: 
2002
Reference: 
Protein Sci
Pages: 
2924-2931
Lab: 
Publication Type: 
Publication Subject: 

De novo determination of protein backbone structure from residual dipolar couplings using Rosetta

Authors: 
Rohl, C. A. and Baker, D.
Volume: 
124
Link to Article: 
Year: 
2002
Reference: 
J Am Chem Soc
Pages: 
2723-2729
Lab: 
Publication Type: 
Publication Subject: 

Distributions of beta sheets in proteins with application to structure prediction

Authors: 
Ruczinski, I., Kooperberg, C., Bonneau, R. and Baker, D.
Volume: 
48
Link to Article: 
Year: 
2002
Reference: 
Proteins
Pages: 
85-97
Lab: 
Publication Type: 
Publication Subject: 

Evaluation of structural and evolutionary contributions to deleterious mutation prediction

Authors: 
Saunders, C. T. and Baker, D.
Volume: 
322
Link to Article: 
Year: 
2002
Reference: 
J Mol Biol
Pages: 
891-901
Lab: 
Publication Type: 
Publication Subject: 

Nanocapillary liquid chromatography interfaced to tandem matrix-assisted laser desorption/ionization and electrospray ionization-mass spectrometry: mapping the nuclear proteome of human fibroblasts

Authors: 
Malmstrom, J., Larsen, K., Malmstrom, L., Tufvesson, E., Parker, K., Marchese, J., Williamson, B., Patterson, D., Martin, S., Juhasz, P., Westergren-Thorsson, G. and Marko-Varga, G.
Volume: 
24
Link to Article: 
Year: 
2003
Reference: 
Electrophoresis
Pages: 
3806-3814
Publication Type: 
Publication Subject: 

Convergent mechanisms for recognition of divergent cytokines by the shared signaling receptor gp130

Authors: 
Boulanger, M. J., Bankovich, A. J., Kortemme, T., Baker, D. and Garcia, K. C.
Volume: 
12
Link to Article: 
Year: 
2003
Reference: 
Mol Cell
Pages: 
577-589
Publication Type: 
Publication Subject: 

Rosetta predictions in CASP5: successes, failures, and prospects for complete automation

Authors: 
Bradley, P., Chivian, D., Meiler, J., Misura, K. M., Rohl, C. A., Schief, W. R., Wedemeyer, W. J., Schueler-Furman, O., Murphy, P., Schonbrun, J., Strauss, C. E. and Baker, D.
Volume: 
53 Suppl 6
Link to Article: 
Year: 
2003
Reference: 
Proteins
Pages: 
457-468
Lab: 
Publication Type: 
Publication Subject: 

Automated prediction of CASP-5 structures using the Robetta server

Authors: 
Chivian, D., Kim, D. E., Malmstrom, L., Bradley, P., Robertson, T., Murphy, P., Strauss, C. E., Bonneau, R., Rohl, C. A. and Baker, D.
Volume: 
53 Suppl 6
Link to Article: 
Year: 
2003
Reference: 
Proteins
Pages: 
524-533
Lab: 
Publication Type: 
Publication Subject: 

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