Ab initio methods Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Chivian, D., Robertson, T., Bonneau, R. and Baker, D. Volume: 44Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: Methods Biochem AnalPages: 547-557Lab: BakerPublication Type: ReviewPublication Subject: Other Rosetta Papers Read more about Ab initio methods
A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Dantas, G., Kuhlman, B., Callender, D., Wong, M. and Baker, D. Volume: 332Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: J Mol BiolPages: 449-460Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins
Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Gray, J. J., Moughon, S., Wang, C., Schueler-Furman, O., Kuhlman, B., Rohl, C. A. and Baker, D. Volume: 331Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: J Mol BiolPages: 281-299Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations
Protein-protein docking predictions for the CAPRI experiment Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Gray, J. J., Moughon, S. E., Kortemme, T., Schueler-Furman, O., Misura, K. M., Morozov, A. V. and Baker, D. Volume: 52Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: ProteinsPages: 118-122Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about Protein-protein docking predictions for the CAPRI experiment
Assigning function to yeast proteins by integration of technologies Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Hazbun, T. R., Malmstrom, L., Anderson, S., Graczyk, B. J., Fox, B., Riffle, M., Sundin, B. A., Aranda, J. D., McDonald, W. H., Chiu, C. H., Snydsman, B. E., Bradley, P., Muller, E. G., Fields, S., Baker, D., Yates, J. R., 3rd and Davis, T. N. Volume: 12Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: Mol CellPages: 1353-1365Lab: Other LabsPublication Type: ApplicationPublication Subject: Other Rosetta Papers Read more about Assigning function to yeast proteins by integration of technologies
An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Kortemme, T., Morozov, A. V. and Baker, D. Volume: 326Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: J Mol BiolPages: 1239-1259Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes
Design of a novel globular protein fold with atomic-level accuracy Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Kuhlman, B., Dantas, G., Ireton, G. C., Varani, G., Stoddard, B. L. and Baker, D. Volume: 302Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: SciencePages: 1364-1368Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about Design of a novel globular protein fold with atomic-level accuracy
Symmetry recognizing asymmetry: analysis of the interactions between the C-type lectin-like immunoreceptor NKG2D and MHC class I-like ligands Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: McFarland, B. J., Kortemme, T., Yu, S. F., Baker, D. and Strong, R. K. Volume: 11Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: StructurePages: 411-422Lab: Other LabsPublication Type: ApplicationPublication Subject: Other Rosetta Papers Read more about Symmetry recognizing asymmetry: analysis of the interactions between the C-type lectin-like immunoreceptor NKG2D and MHC class I-like ligands
Rapid protein fold determination using unassigned NMR data Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Meiler, J. and Baker, D. Volume: 100Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: Proc Natl Acad Sci U S APages: 15404-15409Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about Rapid protein fold determination using unassigned NMR data
Coupled prediction of protein secondary and tertiary structure Submitted by Anonymous on Fri, 2010-11-12 04:39 Authors: Meiler, J. and Baker, D. Volume: 100Link to Article: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...Year: 2003Reference: Proc Natl Acad Sci U S APages: 12105-12110Lab: BakerPublication Type: MethodPublication Subject: Other Rosetta Papers Read more about Coupled prediction of protein secondary and tertiary structure