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Baker

Institute: 
University of Washington
Machine name: 
baker
PI NCBI name: 
Baker D
PI email: 
dabaker@u.washington.edu

The sequences of small proteins are not extensively optimized for rapid folding by natural selection

Authors: 
Kim, D. E., Gu, H. and Baker, D.
Volume: 
95
Link to Article: 
Year: 
1998
Reference: 
Proc Natl Acad Sci U S A
Pages: 
4982-4986
Lab: 
Publication Type: 
Publication Subject: 

The single helix in protein L is largely disrupted at the rate-limiting step in folding

Authors: 
Kim, D. E., Yi, Q., Gladwin, S. T., Goldberg, J. M. and Baker, D.
Volume: 
284
Link to Article: 
Year: 
1998
Reference: 
J Mol Biol
Pages: 
807-815
Lab: 
Publication Type: 
Publication Subject: 

Contributions of solvent-solvent hydrogen bonding and van der Waals interactions to the attraction between methane molecules in water

Authors: 
Rank, J. A. and Baker, D.
Volume: 
71
Link to Article: 
Year: 
1998
Reference: 
Biophys Chem
Pages: 
199-204
Lab: 
Publication Type: 
Publication Subject: 

Clustering of low-energy conformations near the native structures of small proteins

Authors: 
Shortle, D., Simons, K. T. and Baker, D.
Volume: 
95
Link to Article: 
Year: 
1998
Reference: 
Proc Natl Acad Sci U S A
Pages: 
11158-11162
Lab: 
Publication Type: 
Publication Subject: 

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures

Authors: 
Alm, E. and Baker, D.
Volume: 
96
Link to Article: 
Year: 
1999
Reference: 
Proc Natl Acad Sci U S A
Pages: 
11305-11310
Lab: 
Publication Type: 
Publication Subject: 

Robustness of protein folding kinetics to surface hydrophobic substitutions

Authors: 
Gu, H., Doshi, N., Kim, D. E., Simons, K. T., Santiago, J. V., Nauli, S. and Baker, D.
Volume: 
8
Link to Article: 
Year: 
1999
Reference: 
Protein Sci
Pages: 
2734-2741
Lab: 
Publication Type: 
Publication Subject: 

Experiment and theory highlight role of native state topology in SH3 folding

Authors: 
Riddle, D. S., Grantcharova, V. P., Santiago, J. V., Alm, E., Ruczinski, I. and Baker, D.
Volume: 
6
Link to Article: 
Year: 
1999
Reference: 
Nat Struct Biol
Pages: 
1016-1024
Lab: 
Publication Type: 
Publication Subject: 

Structural transitions in the protein L denatured state ensemble

Authors: 
Scalley, M. L., Nauli, S., Gladwin, S. T. and Baker, D.
Volume: 
38
Link to Article: 
Year: 
1999
Reference: 
Biochemistry
Pages: 
15927-15935
Lab: 
Publication Type: 
Publication Subject: 

Ab initio protein structure prediction of CASP III targets using ROSETTA

Authors: 
Simons, K. T., Bonneau, R., Ruczinski, I. and Baker, D.
Volume: 
Suppl 3
Link to Article: 
Year: 
1999
Reference: 
Proteins
Pages: 
171-176
Lab: 
Publication Type: 
Publication Subject: 

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