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Baker

Institute: 
University of Washington
Machine name: 
baker
PI NCBI name: 
Baker D
PI email: 
dabaker@u.washington.edu

Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Nauli, S., Kuhlman, B., Le Trong, I., Stenkamp, R. E., Teller, D. and Baker, D.
Volume: 
11
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2002
Reference: 
Protein Sci
Pages: 
2924-2931
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

De novo determination of protein backbone structure from residual dipolar couplings using Rosetta

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Rohl, C. A. and Baker, D.
Volume: 
124
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2002
Reference: 
J Am Chem Soc
Pages: 
2723-2729
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Distributions of beta sheets in proteins with application to structure prediction

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Ruczinski, I., Kooperberg, C., Bonneau, R. and Baker, D.
Volume: 
48
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2002
Reference: 
Proteins
Pages: 
85-97
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Evaluation of structural and evolutionary contributions to deleterious mutation prediction

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Saunders, C. T. and Baker, D.
Volume: 
322
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2002
Reference: 
J Mol Biol
Pages: 
891-901
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Rosetta predictions in CASP5: successes, failures, and prospects for complete automation

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Bradley, P., Chivian, D., Meiler, J., Misura, K. M., Rohl, C. A., Schief, W. R., Wedemeyer, W. J., Schueler-Furman, O., Murphy, P., Schonbrun, J., Strauss, C. E. and Baker, D.
Volume: 
53 Suppl 6
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2003
Reference: 
Proteins
Pages: 
457-468
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Automated prediction of CASP-5 structures using the Robetta server

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Chivian, D., Kim, D. E., Malmstrom, L., Bradley, P., Robertson, T., Murphy, P., Strauss, C. E., Bonneau, R., Rohl, C. A. and Baker, D.
Volume: 
53 Suppl 6
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2003
Reference: 
Proteins
Pages: 
524-533
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Dantas, G., Kuhlman, B., Callender, D., Wong, M. and Baker, D.
Volume: 
332
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2003
Reference: 
J Mol Biol
Pages: 
449-460
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations

Submitted by Anonymous on Fri, 2010-11-12 04:39
Authors: 
Gray, J. J., Moughon, S., Wang, C., Schueler-Furman, O., Kuhlman, B., Rohl, C. A. and Baker, D.
Volume: 
331
Link to Article: 
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...
Year: 
2003
Reference: 
J Mol Biol
Pages: 
281-299
Lab: 
Baker
Publication Type: 
Method
Publication Subject: 
Other Rosetta Papers

Pages