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De novo prediction of three-dimensional structures for major protein families

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Bonneau, R., Strauss, C. E., Rohl, C. A., Chivian, D., Bradley, P., Malmstrom, L., Robertson, T. and Baker, D.

Volume:

322

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

J Mol Biol

Pages:

65-78

Lab:

Publication Type:

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Other Rosetta Papers

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A simple physical model for binding energy hot spots in protein-protein complexes

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Kortemme, T. and Baker, D.

Volume:

99

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

Proc Natl Acad Sci U S A

Pages:

14116-14121

Lab:

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Other Rosetta Papers

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Accurate computer-based design of a new backbone conformation in the second turn of protein L

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Kuhlman, B., O'Neill, J. W., Kim, D. E., Zhang, K. Y. and Baker, D.

Volume:

315

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

J Mol Biol

Pages:

471-477

Lab:

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Other Rosetta Papers

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Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Nauli, S., Kuhlman, B., Le Trong, I., Stenkamp, R. E., Teller, D. and Baker, D.

Volume:

11

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

Protein Sci

Pages:

2924-2931

Lab:

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Other Rosetta Papers

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De novo determination of protein backbone structure from residual dipolar couplings using Rosetta

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Rohl, C. A. and Baker, D.

Volume:

124

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

J Am Chem Soc

Pages:

2723-2729

Lab:

Publication Type:

Publication Subject:

Other Rosetta Papers

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Distributions of beta sheets in proteins with application to structure prediction

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Ruczinski, I., Kooperberg, C., Bonneau, R. and Baker, D.

Volume:

48

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

Proteins

Pages:

85-97

Lab:

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Publication Subject:

Other Rosetta Papers

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Evaluation of structural and evolutionary contributions to deleterious mutation prediction

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Saunders, C. T. and Baker, D.

Volume:

322

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2002

Reference:

J Mol Biol

Pages:

891-901

Lab:

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Other Rosetta Papers

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Rosetta predictions in CASP5: successes, failures, and prospects for complete automation

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Bradley, P., Chivian, D., Meiler, J., Misura, K. M., Rohl, C. A., Schief, W. R., Wedemeyer, W. J., Schueler-Furman, O., Murphy, P., Schonbrun, J., Strauss, C. E. and Baker, D.

Volume:

53 Suppl 6

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2003

Reference:

Proteins

Pages:

457-468

Lab:

Publication Type:

Publication Subject:

Other Rosetta Papers

Read more about Rosetta predictions in CASP5: successes, failures, and prospects for complete automation

Automated prediction of CASP-5 structures using the Robetta server

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Chivian, D., Kim, D. E., Malmstrom, L., Bradley, P., Robertson, T., Murphy, P., Strauss, C. E., Bonneau, R., Rohl, C. A. and Baker, D.

Volume:

53 Suppl 6

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2003

Reference:

Proteins

Pages:

524-533

Lab:

Publication Type:

Publication Subject:

Other Rosetta Papers

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A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins

Submitted by Anonymous on Fri, 2010-11-12 04:39

Authors:

Dantas, G., Kuhlman, B., Callender, D., Wong, M. and Baker, D.

Volume:

332

Link to Article:

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Citati...

Year:

2003

Reference:

J Mol Biol

Pages:

449-460

Lab:

Publication Type:

Publication Subject:

Other Rosetta Papers

Read more about A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins

Pages